RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 UTYO14607 1347 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 VSNL1P62760 191 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 MTF1Q14872 753 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 CNGA3Q16281 694 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 SHC4Q6S5L8 630 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ZNF555Q8NEP9 628 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ARL2BPQ9Y2Y0 163 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ARAP3Q8WWN8 1544 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 KCNN4O15554 427 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 SUPT3HO75486 399 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 CCDC159P0C7I6 412 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 SERPINB10P48595 397 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 CARSP49589 748 aaKnown RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ERFP50548 548 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 WDR24Q96S15 920 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 NPHS2Q9NP85 383 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 A8MXQ7 604 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 PIGBQ92521 554 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 PGBD4Q96DM1 585 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 LIMA1Q9UHB6 759 aaKnown RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ANGPT2O15123 496 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 EFCAB14O75071 495 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 APOA1P02647 267 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 PRDX5P30044 214 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 TRPC1P48995 793 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 HLFQ16534 295 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ACCSLQ4AC99 568 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ACBD5Q5T8D3 534 aaPredicted RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 KIAA2013Q8IYS2 634 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 CLMNQ96JQ2 1002 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 CYP26A1O43174 497 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 TDP2O95551 362 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 AGTP01019 485 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 MRPL28Q13084 256 aaKnown RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 ADCK1Q86TW2 530 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 DTX3LQ8TDB6 740 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 NSUN6Q8TEA1 469 aaKnown RBP12.03□□□□□ -0.48
LAMA4-219ENST00000522006 STAMBPL1Q96FJ0 436 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 SIK2Q9H0K1 926 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 PKD2L2Q9NZM6 624 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 LZTS1Q9Y250 596 aa12.03□□□□□ -0.48
LAMA4-219ENST00000522006 MYO5CQ9NQX4 1742 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 DAB1O75553 588 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 RCAN1P53805 252 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 DMC1Q14565 340 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 P3H1Q32P28 736 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 CYFIP1Q7L576 1253 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.48
LAMA4-219ENST00000522006 TRIM54Q9BYV2 358 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.48
LAMA4-219ENST00000522006 FAM196BA6NMK8 535 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 MEFVO15553 781 aaPredicted RBP12.02□□□□□ -0.48
LAMA4-219ENST00000522006 SLC1A1P43005 524 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 SULT1E1P49888 294 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 LONRF1Q17RB8 773 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 DALRD3Q5D0E6 543 aaKnown RBP12.02□□□□□ -0.48
LAMA4-219ENST00000522006 TTC23LQ6PF05 361 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 SYDE1Q6ZW31 735 aaPredicted RBP12.02□□□□□ -0.48
LAMA4-219ENST00000522006 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.48
LAMA4-219ENST00000522006 PID1Q7Z2X4 250 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 AIPL1Q9NZN9 384 aa12.02□□□□□ -0.48
LAMA4-219ENST00000522006 PHF2O75151 1096 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 PSMC5P62195 406 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 CEP55Q53EZ4 464 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 RRM2BQ7LG56 351 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.49
LAMA4-219ENST00000522006 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 TSSK1BQ9BXA7 367 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 ZFATQ9P243 1243 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 VCAM1P19320 739 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 STX19Q8N4C7 294 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 FBXO40Q9UH90 709 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 NNMTP40261 264 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 EPHA10Q5JZY3 1008 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 BTNL9Q6UXG8 535 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 RMDN1Q96DB5 314 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 AGO2Q9UKV8 859 aaKnown RBP12.02□□□□□ -0.49
LAMA4-219ENST00000522006 SNX12Q9UMY4 172 aa12.02□□□□□ -0.49
LAMA4-219ENST00000522006 KRT8P05787 483 aa12.01□□□□□ -0.49
LAMA4-219ENST00000522006 MRPS15P82914 257 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms