RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 APBB1IPQ7Z5R6 666 aaPredicted RBP18.75■□□□□ 0.59
SQLE-205ENST00000521232 RNF135Q8IUD6 432 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 SPIRE2Q8WWL2 714 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 CALML4Q96GE6 196 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 LRFN3Q9BTN0 628 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 APOL5Q9BWW9 433 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 CXCL16Q9H2A7 254 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 DZANK1Q9NVP4 752 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
SQLE-205ENST00000521232 URODP06132 367 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 PLS3P13797 630 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 KLRC2P26717 231 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 CLCN4P51793 760 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 DSG1Q02413 1049 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 GRIN1Q05586 938 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 NAB2Q15742 525 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 ARSHQ5FYA8 562 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 CES5AQ6NT32 575 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 GPR65Q8IYL9 337 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 MRPL4Q9BYD3 311 aaKnown RBP18.74■□□□□ 0.59
SQLE-205ENST00000521232 GPR62Q9BZJ7 368 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 RXFP1Q9HBX9 757 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 ADAM28Q9UKQ2 775 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 CLIC4Q9Y696 253 aa18.74■□□□□ 0.59
SQLE-205ENST00000521232 C2CD2LO14523 706 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 SLC16A4O15374 487 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 TADA2AO75478 443 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 COL9A1P20849 921 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 PROZP22891 400 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 GLUD2P49448 558 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 SMTNP53814 917 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 RAD51AP2Q09MP3 1159 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 RESTQ13127 1097 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 HSP90AA2PQ14568 343 aaPredicted RBP18.73■□□□□ 0.59
SQLE-205ENST00000521232 PTPAQ15257 358 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 HERC4Q5GLZ8 1057 aaPredicted RBP18.73■□□□□ 0.59
SQLE-205ENST00000521232 FUT10Q6P4F1 479 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 TMEM161BQ8NDZ6 487 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 NECTIN4Q96NY8 510 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 PAAF1Q9BRP4 392 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 TARS2Q9BW92 718 aaKnown RBP18.73■□□□□ 0.59
SQLE-205ENST00000521232 BLOC1S4Q9NUP1 217 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 GDAQ9Y2T3 454 aa18.73■□□□□ 0.59
SQLE-205ENST00000521232 GRM5P41594 1212 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 USP41Q3LFD5 358 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 C12orf76Q8N812 135 aaPredicted RBP18.72■□□□□ 0.59
SQLE-205ENST00000521232 LRRC15Q8TF66 581 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 RABGGTAQ92696 567 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 KCNN1Q92952 543 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 SNX21Q969T3 373 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 FBXL18Q96ME1 805 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 CCSER1Q9C0I3 900 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 CDT1Q9H211 546 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 MTMR6Q9Y217 621 aa18.72■□□□□ 0.59
SQLE-205ENST00000521232 NPHP3-ACAD11A0A0J9YXS1 232 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 CASTOR2A6NHX0 329 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 ABLIM1O14639 778 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 TEX28O15482 410 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 BRD1O95696 1058 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 C1RP00736 705 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 MAPTP10636 758 aaKnown RBP18.71■□□□□ 0.59
SQLE-205ENST00000521232 MCF2P10911 925 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 MTHFRP42898 656 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 KARSQ15046 597 aaKnown RBP18.71■□□□□ 0.59
SQLE-205ENST00000521232 XKR4Q5GH76 650 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 RARS2Q5T160 578 aaKnown RBP18.71■□□□□ 0.59
SQLE-205ENST00000521232 KIAA1841Q6NSI8 718 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 ALKAL1Q6UXT8 129 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 PPP1R10Q96QC0 940 aaKnown RBP18.71■□□□□ 0.59
SQLE-205ENST00000521232 LARSQ9P2J5 1176 aaKnown RBP18.71■□□□□ 0.59
SQLE-205ENST00000521232 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 MUTYHQ9UIF7 546 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 CDH22Q9UJ99 828 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 ODF2LQ9ULJ1 636 aa18.71■□□□□ 0.59
SQLE-205ENST00000521232 SRPRBQ9Y5M8 271 aaKnown RBP18.71■□□□□ 0.59
SQLE-205ENST00000521232 FAM86C2PA6NEL3 165 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 ADH1AP07327 375 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 PLCG1P19174 1290 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 NCKAP1LP55160 1127 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
SQLE-205ENST00000521232 STRN3Q13033 797 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 ZNF568Q3ZCX4 644 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 ATAT1Q5SQI0 421 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 KANK3Q6NY19 840 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 FAM173BQ6P4H8 233 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 MPZL3Q6UWV2 235 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 CEP120Q8N960 986 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 RAD54LQ92698 747 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 RIPOR3Q96MK2 946 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 TCHPQ9BT92 498 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 CCDC94Q9BW85 323 aaPredicted RBP18.7■□□□□ 0.58
SQLE-205ENST00000521232 ZSCAN16Q9H4T2 348 aaPredicted RBP18.7■□□□□ 0.58
SQLE-205ENST00000521232 POMKQ9H5K3 350 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.7■□□□□ 0.58
SQLE-205ENST00000521232 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 FNIP2Q9P278 1114 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 MORC2Q9Y6X9 1032 aaPredicted RBP18.7■□□□□ 0.58
SQLE-205ENST00000521232 MYO10Q9HD67 2058 aa18.7■□□□□ 0.58
SQLE-205ENST00000521232 MTCL1Q9Y4B5 1905 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms