RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 GSPT2Q8IYD1 628 aaKnown RBP6.67□□□□□ -1.34
SKP1-208ENST00000521216 MYO1HQ8N1T3 1032 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CXorf38Q8TB03 319 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CLIP3Q96DZ5 547 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CYFIP2Q96F07 1278 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CEP95Q96GE4 821 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 TMX3Q96JJ7 454 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CLPTM1LQ96KA5 538 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CHPF2Q9P2E5 772 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 RUVBL1Q9Y265 456 aaKnown RBP6.67□□□□□ -1.34
SKP1-208ENST00000521216 ACTL7AQ9Y615 435 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 SLC30A1Q9Y6M5 507 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 CAPN14A8MX76 684 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 PATE3B3GLJ2 98 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 GPR32O75388 356 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 HSPA6P17066 643 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 DDCP20711 480 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 ACO1P21399 889 aaKnown RBP6.66□□□□□ -1.34
SKP1-208ENST00000521216 FPR1P21462 350 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 FXR1P51114 621 aaKnown RBP eCLIP6.66□□□□□ -1.34
SKP1-208ENST00000521216 ZNF267Q14586 743 aaPredicted RBP6.66□□□□□ -1.34
SKP1-208ENST00000521216 MLC1Q15049 377 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 FAM102BQ5T8I3 360 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 LILRA6Q6PI73 481 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 ZGPATQ8N5A5 531 aaKnown RBP6.66□□□□□ -1.34
SKP1-208ENST00000521216 MPHOSPH9Q99550 1183 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 MAP3K14Q99558 947 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 SPON1Q9HCB6 807 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 MOCS1Q9NZB8 636 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 RAPGEFL1Q9UHV5 662 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 PCDHB1Q9Y5F3 818 aa6.66□□□□□ -1.34
SKP1-208ENST00000521216 WNT10BO00744 389 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 MARCH6O60337 910 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 AMY1AP04745 511 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 HK1P19367 917 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 PCSK1P29120 753 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 CDC42EP1Q00587 391 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 PTH1RQ03431 593 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 PGS1Q32NB8 556 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 CCDC157Q569K6 752 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 FAM47AQ5JRC9 791 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 AFMIDQ63HM1 303 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 ANKS6Q68DC2 871 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 GADL1Q6ZQY3 521 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 ZNF572Q7Z3I7 529 aaPredicted RBP6.65□□□□□ -1.34
SKP1-208ENST00000521216 FAM83AQ86UY5 434 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 ST8SIA2Q92186 375 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 MVB12AQ96EY5 273 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 FAM89AQ96GI7 184 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 ADOQ96SZ5 270 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 NMRK2Q9NPI5 230 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.65□□□□□ -1.34
SKP1-208ENST00000521216 TCAF1Q9Y4C2 921 aa6.65□□□□□ -1.34
SKP1-208ENST00000521216 CFAP20Q9Y6A4 193 aaKnown RBP6.65□□□□□ -1.34
SKP1-208ENST00000521216 PRR5-ARHGAP8B1AHC4 643 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 IPO13O94829 963 aaKnown RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 ALOX15P16050 662 aaPredicted RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 HIBADHP31937 336 aaKnown RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 GUCY1A2P33402 732 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 ALDH1A3P47895 512 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 FLT3LGP49771 235 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 RAP2BP61225 183 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 TARDBPQ13148 414 aaKnown RBP eCLIP6.64□□□□□ -1.35
SKP1-208ENST00000521216 SP140Q13342 867 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 GTF2H3Q13889 308 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 CXorf57Q6NSI4 855 aaKnown RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 EPM2AIP1Q7L775 607 aaPredicted RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 APBB1IPQ7Z5R6 666 aaPredicted RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 C14orf80Q86SX3 495 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 TTC7BQ86TV6 843 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 ANKRD35Q8N283 1001 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 PRR18Q8N4B5 295 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 ZNF808Q8N4W9 903 aaPredicted RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 CAMKK1Q8N5S9 505 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 DNERQ8NFT8 737 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 SLC35B2Q8TB61 432 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 ATXN2LQ8WWM7 1075 aaKnown RBP6.64□□□□□ -1.35
SKP1-208ENST00000521216 HPS3Q969F9 1004 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 MIEF2Q96C03 454 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 PGBD4Q96DM1 585 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 SAMD11Q96NU1 681 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 ANLNQ9NQW6 1124 aa6.64□□□□□ -1.35
SKP1-208ENST00000521216 U2AF1L5P0DN76 240 aaPredicted RBP6.63□□□□□ -1.35
SKP1-208ENST00000521216 MYBP10242 640 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 ATF3P18847 181 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 ATP5JP18859 108 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 LPOP22079 712 aaPredicted RBP6.63□□□□□ -1.35
SKP1-208ENST00000521216 U2AF1Q01081 240 aaKnown RBP eCLIP6.63□□□□□ -1.359e-7■■■■□ 24.3
SKP1-208ENST00000521216 DSC2Q02487 901 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 CREMQ03060 361 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 MINDY4Q4G0A6 757 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 KHDC1Q4VXA5 237 aaKnown RBP6.63□□□□□ -1.35
SKP1-208ENST00000521216 SPTY2D1Q68D10 685 aaPredicted RBP6.63□□□□□ -1.35
SKP1-208ENST00000521216 TCEAL8Q8IYN2 117 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 MAGEB6Q8N7X4 407 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 BORCS6Q96GS4 357 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 AIFM3Q96NN9 605 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 MYOCQ99972 504 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms