RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TTC9Q92623 222 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 APOL5Q9BWW9 433 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 EHMT1Q9H9B1 1298 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 RC3H2Q9HBD1 1191 aaKnown RBP4.08□□□□□ -1.76
CPNE3-204ENST00000517862 TMOD2Q9NZR1 351 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 PCDHA4Q9UN74 947 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 CSPG4Q6UVK1 2322 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 MICAL3Q7RTP6 2002 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 DOCK2Q92608 1830 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 KIF20BQ96Q89 1820 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 SART1O43290 800 aaKnown RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 HTR3BO95264 441 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 AFPP02771 609 aaKnown RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 S100BP04271 92 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 CTSBP07858 339 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 GSTP1P09211 210 aaKnown RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 C6orf222P0C671 652 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 FAM153BP0C7A2 387 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 IMPDH2P12268 514 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 AKR1A1P14550 325 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 GUCY2CP25092 1073 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 CTNNB1P35222 781 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 CDKN1CP49918 316 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 PLCD1P51178 756 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 CCNA1P78396 465 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 SIM1P81133 766 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 GSTM4Q03013 218 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 IKBKEQ14164 716 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 INPP5AQ14642 412 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 ARSHQ5FYA8 562 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 JAMLQ86YT9 394 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 DHX37Q8IY37 1157 aaKnown RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 PJA1Q8NG27 643 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 WBP1Q96G27 269 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 PLPPR2Q96GM1 343 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 C11orf84Q9BUA3 381 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-204ENST00000517862 FOXQ1Q9C009 403 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 ARRDC1-AS1Q9H2J1 176 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 CHPF2Q9P2E5 772 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 KLHL3Q9UH77 587 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 PPME1Q9Y570 386 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 MED13Q9UHV7 2174 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 DOCK1Q14185 1865 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 TANC1Q9C0D5 1861 aa4.07□□□□□ -1.76
CPNE3-204ENST00000517862 APCP25054 2843 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 TRIP12Q14669 1992 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 SPAARA0A1B0GVQ0 90 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 PRAMEF27A3QJZ7 478 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 LINC01387J3KSC0 135 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 NARSO43776 548 aaKnown RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 ATE1O95260 518 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 CFBP00751 764 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 F13BP05160 661 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 PDGFRBP09619 1106 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 CYP2C9P11712 490 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 CDC27P30260 824 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 POLR2BP30876 1174 aaKnown RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 RBM10P98175 930 aaKnown RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 VHLLQ6RSH7 139 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 UNC5AQ6ZN44 842 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 ACAD11Q709F0 780 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 NLRP10Q86W26 655 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 UBR7Q8N806 425 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 C19orf47Q8N9M1 422 aaKnown RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 EDEM2Q9BV94 578 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 EMILIN2Q9BXX0 1053 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 ADAM19Q9H013 955 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 S1PR5Q9H228 398 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 POMKQ9H5K3 350 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 GPR108Q9NPR9 543 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 DKK4Q9UBT3 224 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 DBF4Q9UBU7 674 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 REV1Q9UBZ9 1251 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 SLC5A6Q9Y289 635 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 HIF3AQ9Y2N7 669 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 SUGT1Q9Y2Z0 365 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 TLN2Q9Y4G6 2542 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 PCSK5Q92824 1860 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 SIPA1L3O60292 1781 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 SPAG17Q6Q759 2223 aa4.06□□□□□ -1.76
CPNE3-204ENST00000517862 ASCC3Q8N3C0 2202 aaKnown RBP4.06□□□□□ -1.76
CPNE3-204ENST00000517862 CLEC18AA5D8T8 446 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 MEIS3P2A8K0S8 358 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 NPIPB6E9PJ23 425 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 RBAK-RBAKDNI3L0D1 243 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 SUSD5O60279 629 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 IQCF3P0C7M6 154 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 PLCG1P19174 1290 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CST5P28325 142 aaPredicted RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 ADORA2AP29274 412 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 L1CAMP32004 1257 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CCT4P50991 539 aaKnown RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 TNFAIP2Q03169 654 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 SPP2Q13103 211 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 ITGA7Q13683 1181 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 TCEA2Q15560 299 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 SLC10A6Q3KNW5 377 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 ODR4Q5SWX8 454 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 FOXB2Q5VYV0 432 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms