RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 DMTF1Q9Y222 760 aa0.04□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PCDHB14Q9Y5E9 798 aa0.04□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TTC3P53804 2025 aa0.04□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DSPP15924 2871 aaKnown RBP0.04□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SCN5AQ14524 2016 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 LAMA3Q16787 3333 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 IGKV3D-15A0A087WSY6 115 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PEX1O43933 1283 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DNAJC6O75061 913 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 H2AFYO75367 372 aaKnown RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CRLF1O75462 422 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 KRT38O76015 456 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 KRTAP1-4P0C5Y4 121 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 NHLRC4P0CG21 123 aaPredicted RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 UBTFP17480 764 aaKnown RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 GRIA3P42263 894 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SF1Q15637 639 aaKnown RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 RASAL3Q86YV0 1011 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CCDC103Q8IW40 242 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 BCL6BQ8N143 479 aaPredicted RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PHC3Q8NDX5 983 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 FBXO27Q8NI29 283 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SLC7A14Q8TBB6 771 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ATP2A3Q93084 1043 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MED30Q96HR3 178 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CALR3Q96L12 384 aaKnown RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DMRTB1Q96MA1 342 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CITED4Q96RK1 184 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 LSM14BQ9BX40 385 aaKnown RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 EHMT1Q9H9B1 1298 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF556Q9HAH1 456 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 FAM120CQ9NX05 1096 aaKnown RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 GALNT8Q9NY28 637 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CGGBP1Q9UFW8 167 aaPredicted RBP0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 KCNG2Q9UJ96 466 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 EFR3BQ9Y2G0 817 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CEP295Q9C0D2 2601 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 HERC2O95714 4834 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 NBEAL1Q6ZS30 2694 aa0.03□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DNHD1Q96M86 4753 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FAM208BQ5VWN6 2430 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TLN1Q9Y490 2541 aaKnown RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LINC00473A8K010 186 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TARM1B6A8C7 271 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 GIPC1O14908 333 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 HOXA3O43365 443 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ZG16O60844 167 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CFBP00751 764 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PTGS1P23219 599 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MC4RP32245 332 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 GLIPR1P48060 266 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RBM25P49756 843 aaKnown RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CRIP2P52943 208 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 EPHA5P54756 1037 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SESN2P58004 480 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 GRB10Q13322 594 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 EIF4EBP2Q13542 120 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 DSC3Q14574 896 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LPAL2Q16609 132 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KAZNQ674X7 775 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 BTNL9Q6UXG8 535 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 COLCA1Q6ZS62 124 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 Q6ZVH6 145 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FAM83AQ86UY5 434 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PIM3Q86V86 326 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SPATA2LQ8IUW3 424 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KIAA0825Q8IV33 1275 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PTCD3Q96EY7 689 aaKnown RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CHAMP1Q96JM3 812 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MMS19Q96T76 1030 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 BTBD2Q9BX70 525 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 C12orf49Q9H741 205 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SPON1Q9HCB6 807 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 WHRNQ9P202 907 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ST3GAL5Q9UNP4 418 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 USP15Q9Y4E8 981 aaPredicted RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ATXN2Q99700 1313 aaKnown RBP0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CFAP46Q8IYW2 2715 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MXRA5Q9NR99 2828 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CELSR3Q9NYQ7 3312 aa0.02□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PRRC2CQ9Y520 2896 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 BIRC6Q9NR09 4857 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PRRT4C9JH25 899 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MYO1FO00160 1098 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TRAFD1O14545 582 aaPredicted RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ATE1O95260 518 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 JUNP05412 331 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FOLR3P41439 243 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 HLCSP50747 726 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ARHGAP4P98171 946 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LSAMPQ13449 338 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CAMK2GQ13555 558 aaPredicted RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MPP2Q14168 576 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TCEAL1Q15170 157 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ENOX2Q16206 610 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FAM153CQ494X1 144 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SPDYE7PQ495Y7 208 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms