RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 PCDHB15Q9Y5E8 787 aa8.7□□□□□ -1.02
CLDND1-229ENST00000513988 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 POLQO75417 2590 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 ABCA7Q8IZY2 2146 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 B4GALT3O60512 393 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 MAFO75444 373 aaPredicted RBP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 IL12RB1P42701 662 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 KPNA1P52294 538 aaPredicted RBP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 MLLT6P55198 1093 aaPredicted RBP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 DSG1Q02413 1049 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 FMNL3Q8IVF7 1028 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 SAMD3Q8N6K7 520 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 CSGALNACT1Q8TDX6 532 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 LPPQ93052 612 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 OSBP2Q969R2 916 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 FAM193BQ96PV7 902 aaPredicted RBP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 NAPBQ9H115 298 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 BCL11AQ9H165 835 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLDND1-229ENST00000513988 DACT1Q9NYF0 836 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 PTPRBP23467 1997 aa8.69□□□□□ -1.02
CLDND1-229ENST00000513988 PDCD11Q14690 1871 aaKnown RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 THADAQ6YHU6 1953 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 EVPLQ92817 2033 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 ATG2BQ96BY7 2078 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 GCOM1H8Y6P7 765 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 NRP1O14786 923 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 ZNF263O14978 683 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 RRP8O43159 456 aaKnown RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 OPHN1O60890 802 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 GPR32O75388 356 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 VTNP04004 478 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 C8AP07357 584 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 POLR2MP0CAP2 368 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 PSMC3P17980 439 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 FCARP24071 287 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 HOXA9P31269 272 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 ZNF76P36508 570 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 CTDSPL2Q05D32 466 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 SERINC3Q13530 473 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 MAPK6Q16659 721 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 PMS2CLQ68D20 193 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 TOGARAM2Q6ZUX3 1019 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 C11orf74Q86VG3 221 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 CLASRPQ8N2M8 674 aaKnown RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 CAMKK1Q8N5S9 505 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 URGCPQ8TCY9 931 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 WBP1Q96G27 269 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 KIF2CQ99661 725 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 TMEM175Q9BSA9 504 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 AMNQ9BXJ7 453 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 TRIM4Q9C037 500 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 C8orf33Q9H7E9 229 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 VAT1LQ9HCJ6 419 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 POLMQ9NP87 494 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 TOMM22Q9NS69 142 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 HCFC1R1Q9NWW0 138 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 FNIP2Q9P278 1114 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 MBD1Q9UIS9 605 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 FBXW11Q9UKB1 542 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 EXOC6BQ9Y2D4 811 aa8.68□□□□□ -1.02
CLDND1-229ENST00000513988 PRG3Q9Y2Y8 225 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 SETD2Q9BYW2 2564 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 MUC22E2RYF6 1773 aaPredicted RBP8.68□□□□□ -1.02
CLDND1-229ENST00000513988 SLC38A8A6NNN8 435 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 B4E1Z4 1266 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 ATG13O75143 517 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 UTP20O75691 2785 aaKnown RBP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 DDHD2O94830 711 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 RPL17P18621 184 aaKnown RBP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 PI4KAP42356 2102 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 SOX9P48436 509 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 DHPSP49366 369 aaPredicted RBP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 CREMQ03060 361 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 CCINQ13939 588 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 CCDC184Q52MB2 194 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 TMPRSS7Q7RTY8 843 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 NLRX1Q86UT6 975 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 DEPDC1BQ8WUY9 529 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 APPBP2Q92624 585 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 MBOAT7Q96N66 472 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 CAMK1GQ96NX5 476 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 HHIPQ96QV1 700 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 PCYT2Q99447 389 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 NOTCH4Q99466 2003 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 GTPBP2Q9BX10 602 aaKnown RBP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 SEMA4CQ9C0C4 833 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 DNMT3BQ9UBC3 853 aaKnown RBP8.67□□□□□ -1.02
CLDND1-229ENST00000513988 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
CLDND1-229ENST00000513988 SPECC1L-ADORA2AF8WAN1 911 aa8.66□□□□□ -1.02
CLDND1-229ENST00000513988 ZNF862O60290 1169 aa8.66□□□□□ -1.02
CLDND1-229ENST00000513988 ATP9AO75110 1047 aa8.66□□□□□ -1.02
CLDND1-229ENST00000513988 OFD1O75665 1012 aa8.66□□□□□ -1.02
CLDND1-229ENST00000513988 KCNA2P16389 499 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms