RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SSBP05455 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
HTT-212ENST00000513639 PRKCBP05771 671 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 EPCAMP16422 314 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 SCP2P22307 547 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 GJB2P29033 226 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 GLUD2P49448 558 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 CLCN4P51793 760 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 DSG1Q02413 1049 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 SIGLEC14Q08ET2 396 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 ELAVL2Q12926 359 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 TUSC3Q13454 348 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 DCAF4L1Q3SXM0 396 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 RARS2Q5T160 578 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 LARP1BQ659C4 914 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 ARL6IP4Q66PJ3 421 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 PDXDC1Q6P996 788 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 C15orf39Q6ZRI6 1047 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 OTOP3Q7RTS5 596 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 TAS1R1Q7RTX1 841 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 GPR149Q86SP6 731 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 ZDHHC14Q8IZN3 488 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 C12orf76Q8N812 135 aaPredicted RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 GSTCDQ8NEC7 633 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 CMASQ8NFW8 434 aaPredicted RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 NTPCRQ9BSD7 190 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 VN1R3Q9BXE9 311 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 RHOBTB2Q9BYZ6 727 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 NXF3Q9H4D5 531 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 SFXN1Q9H9B4 322 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.04□□□□□ -1.12
HTT-212ENST00000513639 KCND2Q9NZV8 630 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 KLK14Q9P0G3 267 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 FNIP2Q9P278 1114 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 RAPGEFL1Q9UHV5 662 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
HTT-212ENST00000513639 CCDC195A0A1B0GUA6 201 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 H0YCG3 227 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 C2CD2LO14523 706 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 TEX28O15482 410 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 B4GALT3O60512 393 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 EFEMP2O95967 443 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 GLUD1P00367 558 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 LIG1P18858 919 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 PDCP20941 246 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 NPTX2P47972 431 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 YARSP54577 528 aaKnown RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 DMP1Q13316 513 aaPredicted RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 HSP90AA2PQ14568 343 aaPredicted RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 ECM1Q16610 540 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 PTPN21Q16825 1174 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 RINT1Q6NUQ1 792 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 DCLRE1AQ6PJP8 1040 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 TMC5Q6UXY8 1006 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 C1orf186Q6ZWK4 172 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 CDR2LQ86X02 465 aaPredicted RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 SUGP1Q8IWZ8 645 aaKnown RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 STAMQ92783 540 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 DDX27Q96GQ7 796 aaKnown RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 CDK5RAP3Q96JB5 506 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 AK8Q96MA6 479 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 UROC1Q96N76 676 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 TCHPQ9BT92 498 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 TTPALQ9BTX7 342 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 HERC2P3Q9BVR0 1158 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 MRPL4Q9BYD3 311 aaKnown RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 CCDC113Q9H0I3 377 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 IRF2BPLQ9H1B7 796 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 PDZD7Q9H5P4 517 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 KMT5AQ9NQR1 393 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 TOPORSQ9NS56 1045 aaPredicted RBP8.03□□□□□ -1.12
HTT-212ENST00000513639 SNTG2Q9NY99 539 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 SORCS3Q9UPU3 1222 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 TNFSF13BQ9Y275 285 aa8.03□□□□□ -1.12
HTT-212ENST00000513639 SF3B1O75533 1304 aaKnown RBP eCLIP8.03□□□□□ -1.12
HTT-212ENST00000513639 ZFHX2Q9C0A1 2572 aaPredicted RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 E9PMD0 336 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 HIP1RO75146 1068 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 GUCY2CP25092 1073 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 UBA7P41226 1012 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 PSEN1P49768 467 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 PEX3P56589 373 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 ATP2C1P98194 919 aaPredicted RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 STRN3Q13033 797 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 NBR1Q14596 966 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 ZRSR1Q15695 479 aaKnown RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 IL17AQ16552 155 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 HYIQ5T013 277 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 NT5DC1Q5TFE4 455 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 FUT10Q6P4F1 479 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 CCDC149Q6ZUS6 474 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 RTL10Q7L3V2 364 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 BRAPQ7Z569 592 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 PALB2Q86YC2 1186 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 RNF168Q8IYW5 571 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms