RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ADGRG1Q9Y653 693 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 A0A0U1RQF3 1178 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 BIN1O00499 593 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 PDXKO00764 312 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ENPP3O14638 875 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ABLIM1O14639 778 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 PSMA7O14818 248 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 CLDN3O15551 220 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ZNF623O75123 536 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 LETM1O95202 739 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 NPTXRO95502 500 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 AMHP03971 560 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 STAG3L1P0CL83 205 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 MCF2P10911 925 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 GARTP22102 1010 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 HOXD13P35453 343 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 PRCPP42785 496 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 MATR3P43243 847 aaKnown RBP eCLIP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 MCL1Q07820 350 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 KYAT1Q16773 422 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 UBXN11Q5T124 520 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 RASIP1Q5U651 963 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 EEF1DP3Q658K8 133 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ISM2Q6H9L7 571 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ARMCX5Q6P1M9 558 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 SLC39A4Q6P5W5 647 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 NUDT18Q6ZVK8 323 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 RTN4RL1Q86UN2 441 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 CDR2LQ86X02 465 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 NELFCDQ8IXH7 590 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 SMYD4Q8IYR2 804 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 GOLGA5Q8TBA6 731 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 POMGNT1Q8WZA1 660 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 TCHPQ9BT92 498 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 EIF2AQ9BY44 585 aaKnown RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 CDT1Q9H211 546 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 ELAC1Q9H777 363 aaKnown RBP8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 TMEM161AQ9NX61 479 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 MAPK8IP1Q9UQF2 711 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 STYXL1Q9Y6J8 313 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 TRIOBPQ9H2D6 2365 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 VWA8A3KMH1 1905 aa8.29□□□□□ -1.08
HMGXB3-204ENST00000513318 MYH10P35580 1976 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 COL4A4P53420 1690 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 A0A0B4J269 797 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 KIAA0391O15091 583 aaKnown RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 OGTO15294 1046 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 TGFB1I1O43294 461 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 HOXA2O43364 376 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 CALUO43852 315 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 EOMESO95936 686 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 ATF7P17544 494 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 BMP6P22004 513 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 NLRP12P59046 1061 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 DEFB103AP81534 67 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 HSP90AA2PQ14568 343 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 STX1AQ16623 288 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 C9orf50Q5SZB4 431 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 SASS6Q6UVJ0 657 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 ECHDC2Q86YB7 292 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 NPAS4Q8IUM7 802 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 C12orf56Q8IXR9 622 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 ADSSL1Q8N142 457 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 MLKLQ8NB16 471 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 RSPH1Q8WYR4 309 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 TOP1MTQ969P6 601 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 PGBD4Q96DM1 585 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 DHTKD1Q96HY7 919 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 ZBTB45Q96K62 511 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 MSTO1Q9BUK6 570 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 KCTD10Q9H3F6 313 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 NXF3Q9H4D5 531 aaKnown RBP8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 AGPAT3Q9NRZ7 376 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 TRAF3IP3Q9Y228 551 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 IPPQ9Y573 584 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 PCDHB7Q9Y5E2 793 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 PCDHB2Q9Y5E7 798 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 TSC2P49815 1807 aa8.28□□□□□ -1.08
HMGXB3-204ENST00000513318 A0A1W2PPC1 479 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 BICDL2A1A5D9 508 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 TISP43B9A030 160 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 ANKRD63C9JTQ0 380 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 RBAK-RBAKDNI3L0D1 243 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 LDHAP00338 332 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 HARSP12081 509 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 ITGA4P13612 1032 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 ATP2A2P16615 1042 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CCNE1P24864 410 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 ADSSP30520 456 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 GRM5P41594 1212 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 FAM189BP81408 668 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 LRRC63Q05C16 580 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms