RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CATSPER4Q7RTX7 472 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 SMG8Q8ND04 991 aaKnown RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 LOXL4Q96JB6 756 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 FAM167AQ96KS9 214 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CACNG4Q9UBN1 327 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 KCNH3Q9ULD8 1083 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 GPSM3Q9Y4H4 160 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 PCDHA10Q9Y5I2 948 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 PIAS3Q9Y6X2 628 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CACNA1EQ15878 2313 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 NCANO14594 1321 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CNTNAP2Q9UHC6 1331 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 HYAL3O43820 417 aaPredicted RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 RXRAP19793 462 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CCNE1P24864 410 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 HOXA9P31269 272 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 HOXA11P31270 313 aaPredicted RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 SREBF1P36956 1147 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 MPLP40238 635 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 SCNN1GP51170 649 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 USP41Q3LFD5 358 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 HEATR3Q7Z4Q2 680 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 MAP4K3Q8IVH8 894 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 GPR65Q8IYL9 337 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CTCFLQ8NI51 663 aaPredicted RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 SLC7A14Q8TBB6 771 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 ADAM32Q8TC27 787 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 ELSPBP1Q96BH3 223 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 ZFP42Q96MM3 310 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 GAD1Q99259 594 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 MAP3K14Q99558 947 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 SH2D3AQ9BRG2 576 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 BRD9Q9H8M2 597 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 ZNF334Q9HCZ1 680 aaPredicted RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 AGPAT5Q9NUQ2 364 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 KLK13Q9UKR3 277 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 LOC400499M0QZD8 3231 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 ASXL3Q9C0F0 2248 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 IGKV6-21A0A0C4DH24 114 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 ARL5CA6NH57 179 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 XYLBO75191 536 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 STBD1O95210 358 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 POU2F2P09086 479 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 HOXA6P31267 233 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 ZNF76P36508 570 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 MLH1P40692 756 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 PXNP49023 591 aaPredicted RBP10.25□□□□□ -0.77
NUP54-211ENST00000512151 FAM78AQ5JUQ0 283 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 LIN9Q5TKA1 542 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 WWC2Q6AWC2 1192 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 RAB11FIP4Q86YS3 637 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 CCDC82Q8N4S0 544 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 GAB3Q8WWW8 586 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 TCEAL4Q96EI5 215 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 EDEM2Q9BV94 578 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 MINDY3Q9H8M7 445 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 IFT122Q9HBG6 1241 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 RIC8AQ9NPQ8 531 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 GDE1Q9NZC3 331 aa10.25□□□□□ -0.77
NUP54-211ENST00000512151 MRPS23Q9Y3D9 190 aaKnown RBP10.25□□□□□ -0.77
NUP54-211ENST00000512151 LAMA5O15230 3695 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 EML5Q05BV3 1969 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 ASCC3Q8N3C0 2202 aaKnown RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 TDRD15B5MCY1 1934 aaKnown RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 ERICH2A1L162 156 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 DDAH1O94760 285 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 RHOP08100 348 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 CYP21A2P08686 494 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 GDI1P31150 447 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 SOX9P48436 509 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 COL28A1Q2UY09 1125 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 VITQ6UXI7 678 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 CACNA2D4Q7Z3S7 1137 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 RHPN2Q8IUC4 686 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 PLEKHM2Q8IWE5 1019 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 SMAP1Q8IYB5 467 aaPredicted RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 LNX1Q8TBB1 728 aaPredicted RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 CRYGNQ8WXF5 182 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 NLRP4Q96MN2 994 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 LZTS2Q9BRK4 669 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 ZNF577Q9BSK1 485 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 TRMT61BQ9BVS5 477 aaKnown RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 COLEC11Q9BWP8 271 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 EIF2AQ9BY44 585 aaKnown RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 SUCLA2Q9P2R7 463 aaPredicted RBP10.24□□□□□ -0.77
NUP54-211ENST00000512151 ADAM28Q9UKQ2 775 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 NEUROG3Q9Y4Z2 214 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 HES2Q9Y543 173 aa10.24□□□□□ -0.77
NUP54-211ENST00000512151 ARNTLO00327 626 aa10.23□□□□□ -0.77
NUP54-211ENST00000512151 EXTL3O43909 919 aa10.23□□□□□ -0.77
NUP54-211ENST00000512151 RPP40O75818 363 aaKnown RBP10.23□□□□□ -0.77
NUP54-211ENST00000512151 ITGA4P13612 1032 aa10.23□□□□□ -0.77
NUP54-211ENST00000512151 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
NUP54-211ENST00000512151 CREMQ03060 361 aa10.23□□□□□ -0.77
NUP54-211ENST00000512151 TRDNQ13061 729 aa10.23□□□□□ -0.77
NUP54-211ENST00000512151 MTERF2Q49AM1 385 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms