RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	CXCL16	Q9H2A7	254 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	SNTG2	Q9NY99	539 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	KLK14	Q9P0G3	267 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	PARP2	Q9UGN5	583 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	SSX2IP	Q9Y2D8	614 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	PHLPP2	Q6ZVD8	1323 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	SFI1	A8K8P3	1242 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081		F8W810	466 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	ABLIM1	O14639	778 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	DCX	O43602	365 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	NR1I2	O75469	434 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	PAPLN	O95428	1278 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	BRD1	O95696	1058 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	PLA2G4B	P0C869	781 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	EPCAM	P16422	314 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	PROZ	P22891	400 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	CLCN4	P51793	760 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	DSG1	Q02413	1049 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	TUSC3	Q13454	348 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	PTPA	Q15257	358 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	SF3A1	Q15459	793 aa	Known RBP	13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	TMEM31	Q5JXX7	168 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	ASTL	Q6HA08	431 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	LLGL2	Q6P1M3	1020 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	ALKAL1	Q6UXT8	129 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	LRRC15	Q8TF66	581 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	MS4A3	Q96HJ5	214 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	GPR62	Q9BZJ7	368 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	KMT5A	Q9NQR1	393 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	MRPL17	Q9NRX2	175 aa	Known RBP	13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	DZANK1	Q9NVP4	752 aa		13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-223	ENST00000511081	TRIP11	Q15643	1979 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	CCDC169	A6NNP5	214 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	RECQL4	O94761	1208 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	TH	P07101	528 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	PLS3	P13797	630 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	UBA7	P41226	1012 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	GRIN1	Q05586	938 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	REST	Q13127	1097 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	TMEM161B	Q8NDZ6	487 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	SNX21	Q969T3	373 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	NECTIN4	Q96NY8	510 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	PLIN2	Q99541	437 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	PAAF1	Q9BRP4	392 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	EMILIN2	Q9BXX0	1053 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	RHOBTB2	Q9BYZ6	727 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	CCSER1	Q9C0I3	900 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	BLOC1S4	Q9NUP1	217 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	FNIP2	Q9P278	1114 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	ADAM28	Q9UKQ2	775 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	MYH11	P35749	1972 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081	WDFY4	Q6ZS81	3184 aa		13.34	□□□□□ -0.27
CLDND1-223	ENST00000511081		K7ELQ4	463 aa	Predicted RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	TEX28	O15482	410 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	COL9A1	P20849	921 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	KLRC2	P26717	231 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	GRM5	P41594	1212 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	MTHFR	P42898	656 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	GLUD2	P49448	558 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	DMP1	Q13316	513 aa	Predicted RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	USP41	Q3LFD5	358 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	CES5A	Q6NT32	575 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	FUT10	Q6P4F1	479 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	LILRA6	Q6PI73	481 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	HDAC7	Q8WUI4	952 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	CALML4	Q96GE6	196 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	CDK5RAP3	Q96JB5	506 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	FBXL18	Q96ME1	805 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	PPP1R10	Q96QC0	940 aa	Known RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	TARS2	Q9BW92	718 aa	Known RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	MRPL4	Q9BYD3	311 aa	Known RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	CDT1	Q9H211	546 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	ODF2L	Q9ULJ1	636 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	MTMR6	Q9Y217	621 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	SRPRB	Q9Y5M8	271 aa	Known RBP	13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	CLIC4	Q9Y696	253 aa		13.33	□□□□□ -0.28
CLDND1-223	ENST00000511081	MYO10	Q9HD67	2058 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	VPS37C	A5D8V6	355 aa	Predicted RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	PRR33	A8MZF0	331 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	TMEM189-UBE2V1	I3L0A0	370 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	SLC16A4	O15374	487 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	ATMIN	O43313	823 aa	Predicted RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	UROD	P06132	367 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	MAPT	P10636	758 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	MCF2	P10911	925 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	LIG1	P18858	919 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	SCP2	P22307	547 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	DDIT3	P35638	169 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZNF131	P52739	623 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	SMTN	P53814	917 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	NCKAP1L	P55160	1127 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZRSR1	Q15695	479 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	TMEM132A	Q24JP5	1023 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	KIAA1841	Q6NSI8	718 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	KANK3	Q6NY19	840 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	CD300LG	Q6UXG3	332 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms