RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 ATP2B1P20020 1258 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 KCNA5P22460 613 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 VAMP1P23763 118 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 DNAJB1P25685 340 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 YWHABP31946 246 aaKnown RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 PHKA2P46019 1235 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 DNM2P50570 870 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 TAGLNQ01995 201 aaKnown RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 CAMK1Q14012 370 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 SAFBQ15424 915 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDPN-209ENST00000510906 CALCRLQ16602 461 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 FAM43BQ6ZT52 329 aaPredicted RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 ALYREFQ86V81 257 aaKnown RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 RHPN2Q8IUC4 686 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 TPH2Q8IWU9 490 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 C4orf19Q8IY42 314 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 KLHL23Q8NBE8 558 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 EDEM1Q92611 657 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 C8orf76Q96K31 380 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 SUSD3Q96L08 255 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 CEP170P1Q96L14 293 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 ZSCAN31Q96LW9 406 aaPredicted RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 NLRP4Q96MN2 994 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 MTMR9Q96QG7 549 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 EIF2AK1Q9BQI3 630 aaKnown RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 LLPHQ9BRT6 129 aaKnown RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 GCOM2Q9BZD3 368 aaPredicted RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 TMEM60Q9H2L4 133 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 NSUN3Q9H649 340 aaKnown RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 RNF19AQ9NV58 838 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 TMEM161AQ9NX61 479 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 PCDHA12Q9UN75 941 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 PLAGL2Q9UPG8 496 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 XIRP2A4UGR9 3374 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 WDFY4Q6ZS81 3184 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 BRWD1Q9NSI6 2320 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 MUC6Q6W4X9 2439 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 MYH9P35579 1960 aaKnown RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 MICAL2O94851 1124 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 SLITRK3O94933 977 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 MCM7P33993 719 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 TXKP42681 527 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 POLGP54098 1239 aaPredicted RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 EHHADHQ08426 723 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 XKR9Q5GH70 373 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 SPOUT1Q5T280 376 aaKnown RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 ZNF410Q86VK4 478 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 ECHDC2Q86YB7 292 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 RNF169Q8NCN4 708 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 FBXO18Q8NFZ0 1043 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 SPPL3Q8TCT6 385 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 SLC7A3Q8WY07 619 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 P2RX5Q93086 422 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 TMEM143Q96AN5 459 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 HSD17B14Q9BPX1 270 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 JPH2Q9BR39 696 aaPredicted RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 LMAN2LQ9H0V9 348 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 DHX33Q9H6R0 707 aaKnown RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 ELAC1Q9H777 363 aaKnown RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 ZSWIM4Q9H7M6 989 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 TTC12Q9H892 705 aaPredicted RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 SH2B1Q9NRF2 756 aaPredicted RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 TYW1Q9NV66 732 aaKnown RBP9.59□□□□□ -0.87
PDPN-209ENST00000510906 EVPLQ92817 2033 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 TRANK1O15050 2925 aa9.59□□□□□ -0.87
PDPN-209ENST00000510906 MYO7AQ13402 2215 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 A0A087WWV3 80 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
PDPN-209ENST00000510906 DGAT1O75907 488 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 ATF7P17544 494 aaPredicted RBP9.58□□□□□ -0.88
PDPN-209ENST00000510906 SFPQP23246 707 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDPN-209ENST00000510906 GTF2F1P35269 517 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDPN-209ENST00000510906 IRS1P35568 1242 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 HMGN5P82970 282 aaKnown RBP9.58□□□□□ -0.88
PDPN-209ENST00000510906 CDC42EP1Q00587 391 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 DNM1Q05193 864 aaKnown RBP9.58□□□□□ -0.88
PDPN-209ENST00000510906 HYAL1Q12794 435 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 EMC2Q15006 297 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 RABEP1Q15276 862 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 ZNF174Q15697 407 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 NAALADL2Q58DX5 795 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 CLLU1OSQ5K130 101 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 LRRC55Q6ZSA7 311 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 OTUD6AQ7L8S5 288 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 FAM184AQ8NB25 1140 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.58□□□□□ -0.88
PDPN-209ENST00000510906 POF1BQ8WVV4 589 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 PRPF31Q8WWY3 499 aaKnown RBP9.58□□□□□ -0.88
PDPN-209ENST00000510906 CASD1Q96PB1 797 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 TMEM117Q9H0C3 514 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 CWH43Q9H720 699 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 IFT122Q9HBG6 1241 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 XPNPEP1Q9NQW7 623 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 PCDHGC5Q9Y5F6 944 aa9.58□□□□□ -0.88
PDPN-209ENST00000510906 COL4A3BPQ9Y5P4 624 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms