RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TSPYL1Q9H0U9 437 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 OBP2BQ9NPH6 170 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 C11orf16Q9NQ32 467 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 STK39Q9UEW8 545 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CFAP43Q8NDM7 1665 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 LRRC9Q6ZRR7 1453 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CUL7Q14999 1698 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 A0A1W2PP55 124 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 KINO60870 393 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ATE1O95260 518 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 NR2F1P10589 423 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 IFNAR1P17181 557 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ITGA6P23229 1130 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CHMP24386 653 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CPA2P48052 419 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 IRX5P78411 483 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 BNIP1Q12981 228 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 BMPR2Q13873 1038 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CLEC16AQ2KHT3 1053 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 FLYWCH1Q4VC44 716 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 KLHDC7AQ5VTJ3 777 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 TAF2Q6P1X5 1199 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 TMEM154Q6P9G4 183 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 DGLUCYQ7Z3D6 616 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 KIF18BQ86Y91 864 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 LRRC59Q96AG4 307 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 C1GALT1C1Q96EU7 318 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 MVB12AQ96EY5 273 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 KRT23Q9C075 422 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 GLT8D2Q9H1C3 349 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 GLRX2Q9NS18 164 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 NMRK1Q9NWW6 199 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 UBA2Q9UBT2 640 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 SERPINB13Q9UIV8 391 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 WDR62O43379 1518 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 TOPBP1Q92547 1522 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 A0A0U1RQK1 487 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 ZNF320A2RRD8 509 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 BLACEA4D250 179 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 CBX4O00257 560 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 GAS7O60861 476 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 NOL3O60936 208 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 QDPRP09417 244 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 DLDP09622 509 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 PDGFRAP16234 1089 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 RFC1P35251 1148 aaPredicted RBP8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 DIO1P49895 249 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 ITIH3Q06033 890 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 DENND5BQ6ZUT9 1274 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 RAB11FIP2Q7L804 512 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 CCDC13Q8IYE1 715 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 TRIML2Q8N7C3 387 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 AGR3Q8TD06 166 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 ST8SIA4Q92187 359 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 NOL10Q9BSC4 688 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 CCDC106Q9BWC9 280 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 BRD8Q9H0E9 1235 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 CYP4F12Q9HCS2 524 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 TM9SF3Q9HD45 589 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 TAS2R3Q9NYW6 316 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 SSX2IPQ9Y2D8 614 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 TTC21BQ7Z4L5 1316 aa8.12□□□□□ -1.11
PDGFRA-206ENST00000508170 NUDT19A8MXV4 375 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 PLSCR1O15162 318 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 PROM1O43490 865 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 SYNCRIPO60506 623 aaKnown RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 BEST1O76090 585 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 NPPAP01160 153 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 ALDH2P05091 517 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 PRLRP16471 622 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 PSMA4P25789 261 aaKnown RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 GPR3P46089 330 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 CCR5P51681 352 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 DDR1Q08345 913 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 LBRQ14739 615 aaKnown RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 AADACL4Q5VUY2 407 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 PEAR1Q5VY43 1037 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 FDX2Q6P4F2 183 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 NCAPG2Q86XI2 1143 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 C2CD5Q86YS7 1000 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 MDM1Q8TC05 714 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 TMEM40Q8WWA1 233 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 MAGEB10Q96LZ2 347 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 NECAB3Q96P71 396 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 LENG8Q96PV6 779 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 EHD1Q9H4M9 534 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 KCND1Q9NSA2 647 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 HOOK1Q9UJC3 728 aaKnown RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 CHTOPQ9Y3Y2 248 aaKnown RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 EFCAB5A4FU69 1503 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 POLA1P09884 1462 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 RAB3GAP2Q9H2M9 1393 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms