RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 AGPAT3Q9NRZ7 376 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 MIOSQ9NXC5 875 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 CACNG4Q9UBN1 327 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 PARP2Q9UGN5 583 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 KCNG1Q9UIX4 513 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 SLC4A7Q9Y6M7 1214 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 CHD7Q9P2D1 2997 aa9.65□□□□□ -0.87
SCAMP1-202ENST00000506858 TTC3P53804 2025 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 RECQL4O94761 1208 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ARHGEF15O94989 841 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 PFKMP08237 780 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 STAG3L1P0CL83 205 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ACTN1P12814 892 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 AXLP30530 894 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 PBX2P40425 430 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 KCNJ6P48051 423 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 TYRO3Q06418 890 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 MCL1Q07820 350 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ALCAMQ13740 583 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 NOLC1Q14978 699 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 SKOR2Q2VWA4 1001 aaPredicted RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 HSP90AA4PQ58FG1 418 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 GLRA4Q5JXX5 417 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 CLLU1OSQ5K130 101 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 SCARA3Q6AZY7 606 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ARMCX5Q6P1M9 558 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 STXBP4Q6ZWJ1 553 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ZNF598Q86UK7 904 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 CBWD2Q8IUF1 395 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 SLC17A8Q8NDX2 589 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 HELQQ8TDG4 1101 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 RABGGTAQ92696 567 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 APBB2Q92870 758 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 GAD1Q99259 594 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 FTHL17Q9BXU8 183 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 DNAJC25Q9H1X3 360 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 TMEM206Q9H813 350 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 HSPBP1Q9NZL4 362 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 AGO2Q9UKV8 859 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 PLAGL2Q9UPG8 496 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 EXOC7Q9UPT5 735 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 PCDHB7Q9Y5E2 793 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 LCHNA4D1U4 455 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 FAM189A1O60320 539 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 B4GALT3O60512 393 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 POMCP01189 267 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 NR3C1P04150 777 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ADRB2P07550 413 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 CXCL8P10145 99 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ITGA4P13612 1032 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 PTMSP20962 102 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 IGFBP6P24592 240 aaPredicted RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ENOX2Q16206 610 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ZCWPW2Q504Y3 356 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 RASIP1Q5U651 963 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 CENPPQ6IPU0 288 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 MRPL10Q7Z7H8 261 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 CRIPAKQ8N1N5 446 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 KCNN1Q92952 543 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 P2RX5Q93086 422 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 TOP1MTQ969P6 601 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 HVCN1Q96D96 273 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 DUSP9Q99956 384 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 ADPGKQ9BRR6 497 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 TYW1Q9NV66 732 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 LRFN2Q9ULH4 789 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 STYXL1Q9Y6J8 313 aa9.64□□□□□ -0.87
SCAMP1-202ENST00000506858 MICAL3Q7RTP6 2002 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 SZT2Q5T011 3432 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 MYO9BQ13459 2157 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 TBKBP1A7MCY6 615 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 OGTO15294 1046 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 ZNF623O75123 536 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 OFD1O75665 1012 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 AMHP03971 560 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 MCF2P10911 925 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 ATP2A2P16615 1042 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 CCNE1P24864 410 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 MLH1P40692 756 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 SCNN1GP51170 649 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 GUCY2FP51841 1108 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 SLC10A6Q3KNW5 377 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 ANO6Q4KMQ2 910 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 CEP135Q66GS9 1140 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 HS2ST1Q7LGA3 356 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 TRIML1Q8N9V2 468 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 PLEKHO2Q8TD55 490 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 SYAP1Q96A49 352 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 POP1Q99575 1024 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 FUCA2Q9BTY2 467 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 PRO3102Q9H379 93 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 C1orf112Q9NSG2 853 aa9.63□□□□□ -0.87
SCAMP1-202ENST00000506858 ARL5CA6NH57 179 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 LACTBL1A8MY62 500 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms