RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 RAB39AQ14964 217 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 UBE3CQ15386 1083 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 KHDC1Q4VXA5 237 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 ANO1Q5XXA6 986 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 SWSAP1Q6NVH7 229 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 APOA5Q6Q788 366 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 ABHD15Q6UXT9 468 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 TAS1R1Q7RTX1 841 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 HEATR3Q7Z4Q2 680 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 SKAP1Q86WV1 359 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 UNC5BQ8IZJ1 945 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 BCL6BQ8N143 479 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 KYQ8NBH2 561 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 PLBD2Q8NHP8 589 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 PHKBQ93100 1093 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 GFM2Q969S9 779 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 APIPQ96GX9 242 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 RIPOR3Q96MK2 946 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 UHRF1Q96T88 793 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 SYT3Q9BQG1 590 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 HERPUD2Q9BSE4 406 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 C11orf84Q9BUA3 381 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 C22orf23Q9BZE7 217 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 RSAD1Q9HA92 442 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 KIAA1586Q9HCI6 787 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 ARFGAP3Q9NP61 516 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 TRMT13Q9NUP7 481 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 PNPOQ9NVS9 261 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 FNIP2Q9P278 1114 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 LRCH1Q9Y2L9 728 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 PCDHA3Q9Y5H8 950 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 SNX13Q9Y5W8 968 aa3.95□□□□□ -1.78
TRAPPC11-205ENST00000506426 A0A1W2PPL8 197 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 KLRG2A4D1S0 409 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 LRRC14BA6NHZ5 514 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 N4BP3O15049 544 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 PEX10O60683 326 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 KNG1P01042 644 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 GAAP10253 952 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 TYRP14679 529 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 HNRNPLP14866 589 aaKnown RBP eCLIP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 SYN1P17600 705 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 PAX3P23760 479 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 POLD1P28340 1107 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 SMARCA1P28370 1054 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 PRIM2P49643 509 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 FOXO4P98177 505 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 EIF4HQ15056 248 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 TMEM132EQ6IEE7 984 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 MPZL3Q6UWV2 235 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 GADL1Q6ZQY3 521 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 Q6ZVL8 140 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 APBB1IPQ7Z5R6 666 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 ANKRD42Q8N9B4 389 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 MYRIPQ8NFW9 859 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZNF480Q8WV37 535 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 HOXB13Q92826 284 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 NKD2Q969F2 451 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 SLC35A4Q96G79 324 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 MRGPRX4Q96LA9 322 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 SAMD11Q96NU1 681 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 NT5C1BQ96P26 610 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 DMRTA2Q96SC8 542 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 VRK1Q99986 396 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 UBA5Q9GZZ9 404 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 CNTD2Q9H8S5 307 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZMAT3Q9HA38 289 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 BCO1Q9HAY6 547 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 ATP6V0A4Q9HBG4 840 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 SARS2Q9NP81 518 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 CNNM1Q9NRU3 951 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 CDC42EP3Q9UKI2 254 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 VWA7Q9Y334 891 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 PCDHA5Q9Y5H7 936 aa3.94□□□□□ -1.78
TRAPPC11-205ENST00000506426 ISM1B1AKI9 464 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 KPNA5O15131 536 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 NPHP1O15259 732 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 GASTP01350 101 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 FTH1P19P0C7X4 201 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 HALP42357 657 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 SLC6A9P48067 706 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 PPM1FP49593 454 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 STAT5BP51692 787 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 KCNQ1P51787 676 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 CDR1P51861 262 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 CASP5P51878 434 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 WNT3AP56704 352 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 TARDBPQ13148 414 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 PLS1Q14651 629 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 RTP5Q14D33 572 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 MST1LQ2TV78 715 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 TMEM95Q3KNT9 176 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 DGKKQ5KSL6 1271 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 IZUMO3Q5VZ72 239 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 TRMT10BQ6PF06 316 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 COL23A1Q86Y22 540 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 SMAP1Q8IYB5 467 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 RTKN2Q8IZC4 609 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 PQLC1Q8N2U9 271 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms