RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 VPS11Q9H270 941 aa7.46□□□□□ -1.22
CHD1-204ENST00000505982 TMEM60Q9H2L4 133 aa7.46□□□□□ -1.22
CHD1-204ENST00000505982 DEF6Q9H4E7 631 aa7.46□□□□□ -1.22
CHD1-204ENST00000505982 DAPK3O43293 454 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 LY86O95711 162 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 HNRNPLP14866 589 aaKnown RBP eCLIP7.45□□□□□ -1.22
CHD1-204ENST00000505982 ZNF28P17035 718 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 PER3P56645 1201 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 FAM193AP78312 1265 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 MEF2AQ02078 507 aaPredicted RBP7.45□□□□□ -1.22
CHD1-204ENST00000505982 PPP3CAQ08209 521 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 THEMIS2Q5TEJ8 643 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 CYB5RLQ6IPT4 315 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 DARS2Q6PI48 645 aaKnown RBP7.45□□□□□ -1.22
CHD1-204ENST00000505982 NPNTQ6UXI9 565 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 C11orf96Q7Z7L8 435 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 TTC7BQ86TV6 843 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 CIR1Q86X95 450 aaPredicted RBP7.45□□□□□ -1.22
CHD1-204ENST00000505982 PARD3BQ8TEW8 1205 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 SLC39A13Q96H72 371 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 TNIP3Q96KP6 325 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 UIMC1Q96RL1 719 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 ZNF747Q9BV97 191 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 OSBPL6Q9BZF3 934 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 TMEM168Q9H0V1 697 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 SLITRK6Q9H5Y7 841 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 L2HGDHQ9H9P8 463 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 STXBP5LQ9Y2K9 1186 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 PCDHGB6Q9Y5F9 930 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 RPTORQ8N122 1335 aa7.45□□□□□ -1.22
CHD1-204ENST00000505982 CAPN8A6NHC0 703 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 PQBP1O60828 265 aaKnown RBP7.44□□□□□ -1.22
CHD1-204ENST00000505982 PHF2O75151 1096 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 TMEM127O75204 238 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 KNG1P01042 644 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 HMGCRP04035 888 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 CHGBP05060 677 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 LTA4HP09960 611 aaKnown RBP7.44□□□□□ -1.22
CHD1-204ENST00000505982 CTSSP25774 331 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 ECHS1P30084 290 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 IL12RB1P42701 662 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 CACNB3P54284 484 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 ANO6Q4KMQ2 910 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 GJC2Q5T442 439 aaPredicted RBP7.44□□□□□ -1.22
CHD1-204ENST00000505982 RTKN2Q8IZC4 609 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 FAM43AQ8N2R8 423 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 OR2I1PQ8NGU4 316 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 UHRF1Q96T88 793 aaPredicted RBP7.44□□□□□ -1.22
CHD1-204ENST00000505982 ELAC2Q9BQ52 826 aaKnown RBP7.44□□□□□ -1.22
CHD1-204ENST00000505982 CD248Q9HCU0 757 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 NR2E3Q9Y5X4 410 aa7.44□□□□□ -1.22
CHD1-204ENST00000505982 ENDOD1O94919 500 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 HRGP04196 525 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 IL13P35225 146 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 PPP2CBP62714 309 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 PPP2CAP67775 309 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 VPS72Q15906 364 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 ARHGEF18Q6ZSZ5 1173 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 RSPH3Q86UC2 560 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 BCL6BQ8N143 479 aaPredicted RBP7.43□□□□□ -1.22
CHD1-204ENST00000505982 PPP1R14CQ8TAE6 165 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 KLHDC4Q8TBB5 520 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 RAB24Q969Q5 203 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 CDK5RAP3Q96JB5 506 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 STRBPQ96SI9 672 aaKnown RBP7.43□□□□□ -1.22
CHD1-204ENST00000505982 MANSC1Q9H8J5 431 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 TDP1Q9NUW8 608 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 FAM184BQ9ULE4 1060 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 PHTF1Q9UMS5 762 aa7.43□□□□□ -1.22
CHD1-204ENST00000505982 A0A1W2PR48 441 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 GPR42O15529 346 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 AMHP03971 560 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 GAAP10253 952 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 POLD1P28340 1107 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 MEOX1P50221 254 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 MAP2K6P52564 334 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 MLLT6P55198 1093 aaPredicted RBP7.42□□□□□ -1.22
CHD1-204ENST00000505982 SEPT2Q15019 361 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 CNN3Q15417 329 aaKnown RBP7.42□□□□□ -1.22
CHD1-204ENST00000505982 LONRF3Q496Y0 759 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 C10orf62Q5T681 223 aaPredicted RBP7.42□□□□□ -1.22
CHD1-204ENST00000505982 RNF220Q5VTB9 566 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 ZNF585AQ6P3V2 769 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 ABHD15Q6UXT9 468 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 MORC1Q86VD1 984 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 UNC5BQ8IZJ1 945 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 DNERQ8NFT8 737 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHD1-204ENST00000505982 GFM2Q969S9 779 aaKnown RBP7.42□□□□□ -1.22
CHD1-204ENST00000505982 YTHDC1Q96MU7 727 aaKnown RBP7.42□□□□□ -1.22
CHD1-204ENST00000505982 LRFN3Q9BTN0 628 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 APOL5Q9BWW9 433 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.42□□□□□ -1.22
CHD1-204ENST00000505982 TCAF1Q9Y4C2 921 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 DAAM1Q9Y4D1 1078 aa7.42□□□□□ -1.22
CHD1-204ENST00000505982 CFAP69A5D8W1 941 aa7.41□□□□□ -1.22
CHD1-204ENST00000505982 GOLIM4O00461 696 aa7.41□□□□□ -1.22
CHD1-204ENST00000505982 SLC16A6O15403 523 aa7.41□□□□□ -1.22
CHD1-204ENST00000505982 MGEA5O60502 916 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms