RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PRKCEQ02156 737 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 DSC1Q08554 894 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 TRDNQ13061 729 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 LRRC32Q14392 662 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 SLC5A9Q2M3M2 681 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 RTP2Q5QGT7 225 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 ZNF746Q6NUN9 644 aaPredicted RBP14.09□□□□□ -0.15
LSM6-204ENST00000504181 RABGGTAQ92696 567 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 IRF7Q92985 503 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 COLEC11Q9BWP8 271 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 AGPAT5Q9NUQ2 364 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 GDE1Q9NZC3 331 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 MSRB2Q9Y3D2 182 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 PCDHA10Q9Y5I2 948 aa14.09□□□□□ -0.15
LSM6-204ENST00000504181 NUP210Q8TEM1 1887 aaPredicted RBP14.09□□□□□ -0.15
LSM6-204ENST00000504181 FAM86B1E9PN63 330 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 NRG2O14511 850 aaPredicted RBP14.08□□□□□ -0.16
LSM6-204ENST00000504181 FAM86B2P0C5J1 330 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 ITGA4P13612 1032 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 MLH1P40692 756 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 SCNN1GP51170 649 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 HNRNPUQ00839 825 aaKnown RBP eCLIP14.08□□□□□ -0.16
LSM6-204ENST00000504181 AXDND1Q5T1B0 1012 aaPredicted RBP14.08□□□□□ -0.16
LSM6-204ENST00000504181 HEATR3Q7Z4Q2 680 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 RHPN2Q8IUC4 686 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 KSR1Q8IVT5 923 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 SMAP1Q8IYB5 467 aaPredicted RBP14.08□□□□□ -0.16
LSM6-204ENST00000504181 GPR65Q8IYL9 337 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 NLRP4Q96MN2 994 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 GAD1Q99259 594 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 CLSTN3Q9BQT9 956 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 ZNF577Q9BSK1 485 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 NRBP2Q9NSY0 501 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 MIOSQ9NXC5 875 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
LSM6-204ENST00000504181 ADAM28Q9UKQ2 775 aa14.08□□□□□ -0.16
LSM6-204ENST00000504181 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.16
LSM6-204ENST00000504181 ACACAQ13085 2346 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 CACNA1EQ15878 2313 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 ARL5CA6NH57 179 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 RHOP08100 348 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 CSRP1P21291 193 aaKnown RBP14.07□□□□□ -0.16
LSM6-204ENST00000504181 SMARCA1P28370 1054 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 CDC42EP1Q00587 391 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 SART3Q15020 963 aaKnown RBP14.07□□□□□ -0.16
LSM6-204ENST00000504181 PSMD5Q16401 504 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 UGCGQ16739 394 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 WDR44Q5JSH3 913 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 UBXN11Q5T124 520 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 ANKRD45Q5TZF3 282 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 NIPA1Q7RTP0 329 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 MAP4K3Q8IVH8 894 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 ZNF654Q8IZM8 581 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 DEFB124Q8NES8 71 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 ZFP42Q96MM3 310 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 ZFP14Q9HCL3 533 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 CEP192Q8TEP8 1941 aa14.07□□□□□ -0.16
LSM6-204ENST00000504181 PTPRBP23467 1997 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 LNP1A1A4G5 178 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 ADAM12O43184 909 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 POU2F2P09086 479 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 HOXA6P31267 233 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 SREBF1P36956 1147 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 FGD1P98174 961 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 FAM78AQ5JUQ0 283 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 VITQ6UXI7 678 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 CEP57Q86XR8 500 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 CCDC82Q8N4S0 544 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 SMG8Q8ND04 991 aaKnown RBP14.06□□□□□ -0.16
LSM6-204ENST00000504181 MAP3K14Q99558 947 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 SH2D3AQ9BRG2 576 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 LZTS2Q9BRK4 669 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 MKNK1Q9BUB5 465 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 TRPV5Q9NQA5 729 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 DIAPH3Q9NSV4 1193 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
LSM6-204ENST00000504181 ZNF638Q14966 1978 aaKnown RBP14.05□□□□□ -0.16
LSM6-204ENST00000504181 IGLV3-22A0A075B6J6 115 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 FOSP01100 380 aaPredicted RBP14.05□□□□□ -0.16
LSM6-204ENST00000504181 PSMC3P17980 439 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 RXRAP19793 462 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 SOX9P48436 509 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 DNM2P50570 870 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 CREB5Q02930 508 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 GLIS3Q8NEA6 775 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
LSM6-204ENST00000504181 HASPINQ8TF76 798 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 UBN1Q9NPG3 1134 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 SUCLA2Q9P2R7 463 aaPredicted RBP14.05□□□□□ -0.16
LSM6-204ENST00000504181 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
LSM6-204ENST00000504181 IPPQ9Y573 584 aa14.05□□□□□ -0.16
LSM6-204ENST00000504181 TMEM150BA6NC51 233 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 SLC38A8A6NNN8 435 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 EXTL3O43909 919 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms