RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 FNBP1Q96RU3 617 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 CGRRF1Q99675 332 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 FAM213AQ9BRX8 229 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 LSM14BQ9BX40 385 aaKnown RBP9.84□□□□□ -0.83
NR1I3-216ENST00000502848 IKZF4Q9H2S9 585 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 ASB7Q9H672 318 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 FAM207AQ9NSI2 230 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-216ENST00000502848 HDAC6Q9UBN7 1215 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 APEX2Q9UBZ4 518 aa9.84□□□□□ -0.83
NR1I3-216ENST00000502848 CPSF3Q9UKF6 684 aaKnown RBP9.84□□□□□ -0.83
NR1I3-216ENST00000502848 MYADML2A6NDP7 307 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-216ENST00000502848 TSPAN1O60635 241 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PGK1P00558 417 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 VTNP04004 478 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 CLCN1P35523 988 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 CYLC1P35663 651 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-216ENST00000502848 GRM5P41594 1212 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PRKCIP41743 596 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 ACLYP53396 1101 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 TRIM32Q13049 653 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PTK7Q13308 1070 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 KCNA10Q16322 511 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 NBPF20Q3BBV1 942 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 CBWD6Q4V339 395 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 CBWD3Q5JTY5 395 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 CBWD5Q5RIA9 395 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 LHX8Q68G74 356 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 NOTUMQ6P988 496 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 SLC27A1Q6PCB7 646 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 ZNF662Q6ZS27 426 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 USP38Q8NB14 1042 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 LMO3Q8TAP4 145 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
NR1I3-216ENST00000502848 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 GLT1D1Q96MS3 346 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 TCHPQ9BT92 498 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 STK33Q9BYT3 514 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 INTS2Q9H0H0 1204 aaKnown RBP9.83□□□□□ -0.84
NR1I3-216ENST00000502848 CDT1Q9H211 546 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 SIX2Q9NPC8 291 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 DERAQ9Y315 318 aa9.83□□□□□ -0.84
NR1I3-216ENST00000502848 TREHO43280 583 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 SERPING1P05155 500 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 EDN1P05305 212 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 CCDC175P0C221 793 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 TRIM49P0CI25 452 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 TRIM49CP0CI26 452 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 ARF4P18085 180 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 JAM2P57087 298 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 KRT83P78385 493 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 MRPS6P82932 125 aaKnown RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 GCNT1Q02742 428 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 SNX17Q15036 470 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 SFMBT2Q5VUG0 894 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 CXCL17Q6UXB2 119 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 RDH13Q8NBN7 331 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 TAF4BQ92750 862 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 CELF4Q9BZC1 486 aaKnown RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 HAPLN2Q9GZV7 340 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 LUC7LQ9NQ29 371 aaKnown RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-216ENST00000502848 CHST12Q9NRB3 414 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 AGPAT5Q9NUQ2 364 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 PHF24Q9UPV7 400 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 TRIM17Q9Y577 477 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
NR1I3-216ENST00000502848 A0A0U1RQG5 324 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-216ENST00000502848 GOLGA8IPA6NC78 632 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 C19orf67A6NJJ6 358 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 LRRC53A6NM62 1247 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 GOLGA8JA6NMD2 632 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 EIF3CLB5ME19 914 aaKnown RBP9.81□□□□□ -0.84
NR1I3-216ENST00000502848 KBTBD13C9JR72 458 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 DNM1LO00429 736 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 EPHB6O15197 1021 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 B4GALT5O43286 388 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-216ENST00000502848 LCA5LO95447 670 aa9.81□□□□□ -0.84
NR1I3-216ENST00000502848 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
NR1I3-216ENST00000502848 GJB1P08034 283 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms