RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 SEMA4AQ9H3S1 761 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 BRMS1Q9HCU9 246 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 SLC2A4RGQ9NR83 387 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 GJB4Q9NTQ9 266 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 ANKEF1Q9NU02 776 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.85
SORT1-208ENST00000495777 DLGAP2Q9P1A6 1054 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 ORC3Q9UBD5 711 aaPredicted RBP9.76□□□□□ -0.85
SORT1-208ENST00000495777 WDR87Q6ZQQ6 2873 aa9.76□□□□□ -0.85
SORT1-208ENST00000495777 B4GALT5O43286 388 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 ZMYND10O75800 440 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 GLRA2P23416 452 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 RARRES1P49788 294 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 GRIK3Q13003 919 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 HTR4Q13639 388 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 SAFBQ15424 915 aaKnown RBP eCLIP9.75□□□□□ -0.85
SORT1-208ENST00000495777 USP41Q3LFD5 358 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 SLC27A1Q6PCB7 646 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 PPP4R3CPQ6ZMV5 832 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 TPH2Q8IWU9 490 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 HACE1Q8IYU2 909 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 B3GALT6Q96L58 329 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 TBC1D17Q9HA65 648 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 ADAM28Q9UKQ2 775 aa9.75□□□□□ -0.85
SORT1-208ENST00000495777 ZFP37Q9Y6Q3 630 aaPredicted RBP9.75□□□□□ -0.85
SORT1-208ENST00000495777 EP300Q09472 2414 aaPredicted RBP9.75□□□□□ -0.85
SORT1-208ENST00000495777 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 MARCH6O60337 910 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 LMNAP02545 664 aaKnown RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 SPATA31D3P0C874 917 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 MYBP10242 640 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 XRCC6P12956 609 aaKnown RBP eCLIP9.74□□□□□ -0.85
SORT1-208ENST00000495777 AKAP5P24588 427 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 GJB2P29033 226 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 ID4P47928 161 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 ST3GAL1Q11201 340 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 NR5A1Q13285 461 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 RTP2Q5QGT7 225 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 CDCA2Q69YH5 1023 aaPredicted RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 SPATA31D4Q6ZUB0 917 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 PALB2Q86YC2 1186 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 GPR152Q8TDT2 470 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 RIN2Q8WYP3 895 aaPredicted RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 PIK3R5Q8WYR1 880 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 C8orf76Q96K31 380 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 PRIMPOLQ96LW4 560 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 APOL6Q9BWW8 343 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 TRIM6Q9C030 488 aaPredicted RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 ARHGEF3Q9NR81 526 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 FBXW11Q9UKB1 542 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
SORT1-208ENST00000495777 CA14Q9ULX7 337 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 PCDHA12Q9UN75 941 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 SF3B1O75533 1304 aaKnown RBP eCLIP9.74□□□□□ -0.85
SORT1-208ENST00000495777 C2orf16Q68DN1 1984 aa9.74□□□□□ -0.85
SORT1-208ENST00000495777 H3BQV1 296 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 TADA2AO75478 443 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 NPTXRO95502 500 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 POU2F2P09086 479 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 HNRNPA1P09651 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
SORT1-208ENST00000495777 FDPSP14324 419 aaKnown RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 RPL17P18621 184 aaKnown RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 HOXA9P31269 272 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 KRT2P35908 639 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 STARD6P59095 220 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 NUCB2P80303 420 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 TUSC3Q13454 348 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 NAB2Q15742 525 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 FAM187BQ17R55 369 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 GET4Q7L5D6 327 aaPredicted RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 CDR2LQ86X02 465 aaPredicted RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 FBXO18Q8NFZ0 1043 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 MTMR9Q96QG7 549 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 CLSTN3Q9BQT9 956 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 PAAF1Q9BRP4 392 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 POLR3FQ9H1D9 316 aaPredicted RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 FZD8Q9H461 694 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 TTC12Q9H892 705 aaPredicted RBP9.73□□□□□ -0.85
SORT1-208ENST00000495777 PIDD1Q9HB75 910 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 NUMBLQ9Y6R0 609 aa9.73□□□□□ -0.85
SORT1-208ENST00000495777 DMXL1Q9Y485 3027 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 STK25O00506 426 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 WNT7AO00755 349 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 PTGESO14684 152 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 JAK2O60674 1132 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 KIF4AO95239 1232 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 DCNP07585 359 aaKnown RBP9.72□□□□□ -0.85
SORT1-208ENST00000495777 SP9P0CG40 484 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 SPATA31C1P0DKV0 1188 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 GLULP15104 373 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 FSHRP23945 695 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 CALCRLQ16602 461 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 DCLRE1AQ6PJP8 1040 aa9.72□□□□□ -0.85
SORT1-208ENST00000495777 PRSS55Q6UWB4 352 aaPredicted RBP9.72□□□□□ -0.85
SORT1-208ENST00000495777 C1orf210Q8IVY1 113 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms