RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 DUSP2Q05923 314 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 USP45Q70EL2 814 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 EPM2AIP1Q7L775 607 aaPredicted RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 GRAMD1CQ8IYS0 662 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 TTC8Q8TAM2 541 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 ZNF480Q8WV37 535 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 MAP3K14Q99558 947 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 PTPN18Q99952 460 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 GTPBP4Q9BZE4 634 aaKnown RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 RCAN3Q9UKA8 241 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 IPPQ9Y573 584 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 PCDHA13Q9Y5I0 950 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 VSTM5A8MXK1 200 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 NRP1O14786 923 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 KIF3BO15066 747 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 SLC26A4O43511 780 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 GASTP01350 101 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 VSIG10L2P0DP72 767 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 LPOP22079 712 aaPredicted RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 EDNRBP24530 442 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 TGFB2P61812 414 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 NFYCQ13952 458 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 ZNF267Q14586 743 aaPredicted RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 SEPT2Q15019 361 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 MST1LQ2TV78 715 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 PGS1Q32NB8 556 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 C3orf36Q3SXR2 165 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 GAGE13Q4V321 117 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 ARHGAP29Q52LW3 1261 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 PPP4R3AQ6IN85 833 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 Q6ZVL8 140 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 Q8N1X5 172 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 GIMAP8Q8ND71 665 aaPredicted RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 OR5M3Q8NGP4 307 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 OR2I1PQ8NGU4 316 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 SLC35G2Q8TBE7 412 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 LMF1Q96S06 567 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 ANLNQ9NQW6 1124 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 GEMIN8Q9NWZ8 242 aaKnown RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 PATE3B3GLJ2 98 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 MTSS1O43312 755 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CDC14BO60729 498 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 ITGA10O75578 1167 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 GYPEP15421 78 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CASRP41180 1078 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 IL10RAQ13651 578 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 PRKD1Q15139 912 aaPredicted RBP3.55□□□□□ -1.84
LRIF1-203ENST00000494675 ATAT1Q5SQI0 421 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CMTM4Q8IZR5 234 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 PQLC1Q8N2U9 271 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CAMKK1Q8N5S9 505 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 Q8TCH9 128 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CCHCR1Q8TD31 782 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 RABGGTAQ92696 567 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 HPS3Q969F9 1004 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 MVB12AQ96EY5 273 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CYFIP2Q96F07 1278 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 NEIL1Q96FI4 390 aaPredicted RBP3.55□□□□□ -1.84
LRIF1-203ENST00000494675 LRRC37BQ96QE4 947 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 CDC5LQ99459 802 aaKnown RBP3.55□□□□□ -1.84
LRIF1-203ENST00000494675 DPYSL5Q9BPU6 564 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 SLC12A5Q9H2X9 1139 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 MANSC1Q9H8J5 431 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 BCO1Q9HAY6 547 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 IL23AQ9NPF7 189 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 TDP1Q9NUW8 608 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 GPRC5DQ9NZD1 345 aa3.55□□□□□ -1.84
LRIF1-203ENST00000494675 A0A1W2PRX2 142 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 ERC2O15083 957 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 CTNND1O60716 968 aaKnown RBP3.54□□□□□ -1.84
LRIF1-203ENST00000494675 CR2P20023 1033 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 CRHR1P34998 444 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 PTPN7P35236 360 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 NPEPPSP55786 919 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 NRN1LQ496H8 165 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 CCDC157Q569K6 752 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 SPDYAQ5MJ70 313 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 PDZD4Q76G19 769 aaPredicted RBP3.54□□□□□ -1.84
LRIF1-203ENST00000494675 RSPH3Q86UC2 560 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 TAX1BP1Q86VP1 789 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 PRR18Q8N4B5 295 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 SHCBP1Q8NEM2 672 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 OR7D4Q8NG98 312 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 HOXB13Q92826 284 aaPredicted RBP3.54□□□□□ -1.84
LRIF1-203ENST00000494675 KAT5Q92993 513 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 GPHA2Q96T91 129 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 SENP6Q9GZR1 1112 aaPredicted RBP3.54□□□□□ -1.84
LRIF1-203ENST00000494675 MEGF9Q9H1U4 602 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 EPC1Q9H2F5 836 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 TRPS1Q9UHF7 1281 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 UBE2QL1A1L167 161 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 ADCY6O43306 1168 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 PRC1O43663 620 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 FXR1P51114 621 aaKnown RBP eCLIP3.54□□□□□ -1.84
LRIF1-203ENST00000494675 FOXE3Q13461 319 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 RIN1Q13671 783 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 SAFB2Q14151 953 aaKnown RBP eCLIP3.54□□□□□ -1.84
LRIF1-203ENST00000494675 THEMIS2Q5TEJ8 643 aa3.54□□□□□ -1.84
LRIF1-203ENST00000494675 SLC4A10Q6U841 1118 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms