RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 BAG5Q9UL15 447 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
COL25A1-204ENST00000494183 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.42
COL25A1-204ENST00000494183 A0A1B0GUA9 196 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 SSU72P8A0A1W2PR75 194 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 NFIBO00712 420 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 HLA-DRAP01903 254 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 VCAM1P19320 739 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 SESN3P58005 492 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 STX1BP61266 288 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 DGKDQ16760 1214 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 SPATA4Q8NEY3 305 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 RAB3IPQ96QF0 476 aaPredicted RBP12.4□□□□□ -0.42
COL25A1-204ENST00000494183 CNOT10Q9H9A5 744 aaKnown RBP12.4□□□□□ -0.42
COL25A1-204ENST00000494183 CYP26B1Q9NR63 512 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 KIAA1210Q9ULL0 1709 aa12.4□□□□□ -0.42
COL25A1-204ENST00000494183 RSPH10B2B2RC85 870 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 RSPH10BP0C881 870 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 CHRNA3P32297 505 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 APPL2Q8NEU8 664 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 PI4K2AQ9BTU6 479 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 UNC45AQ9H3U1 944 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 RASA4BC9J798 803 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 RASA4O43374 803 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 MED24O75448 989 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 EPHX2P34913 555 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 COG7P83436 770 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 AP1B1Q10567 949 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 NTRK3Q16288 839 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 SRRM1Q8IYB3 904 aaKnown RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 EXT2Q93063 718 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 TTC17Q96AE7 1141 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 CHMP6Q96FZ7 201 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 CALR3Q96L12 384 aaKnown RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 PIDD1Q9HB75 910 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 BFARQ9NZS9 450 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 TCRBV5S4A2TA0A5A2 114 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 DPYSL4O14531 572 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 TADA2AO75478 443 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 APOEP02649 317 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 NOP14P78316 857 aaKnown RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 VEPH1Q14D04 833 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 SMAD1Q15797 465 aaKnown RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 FAM49BQ9NUQ9 324 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 KRT38O76015 456 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 CDK17Q00537 523 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 GRB10Q13322 594 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 MMS22LQ6ZRQ5 1243 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 PID1Q7Z2X4 250 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 PPM1NQ8N819 430 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
COL25A1-204ENST00000494183 MKNK1Q9BUB5 465 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 KCNQ5Q9NR82 932 aa12.39□□□□□ -0.43
COL25A1-204ENST00000494183 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-204ENST00000494183 WNT10BO00744 389 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 ZWINTO95229 277 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 TC2NQ8N9U0 490 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 KLHL11Q9NVR0 708 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 PCDHB2Q9Y5E7 798 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 SLC26A4O43511 780 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 SHMT1P34896 483 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 SREBF1P36956 1147 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 GYS2P54840 703 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 SEZ6Q53EL9 994 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
COL25A1-204ENST00000494183 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-204ENST00000494183 SLC35G2Q8TBE7 412 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 RUSC1Q9BVN2 902 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 TMEM131LA2VDJ0 1609 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 NEMP1O14524 444 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 COPEO14579 308 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 EIF3DO15371 548 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL25A1-204ENST00000494183 GRAP2O75791 330 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 KRT14P02533 472 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 GRIK1P39086 918 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 CASP2P42575 452 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 GTF2A2P52657 109 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-204ENST00000494183 RAD9BQ6WBX8 426 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 KCTD17Q8N5Z5 321 aa12.38□□□□□ -0.43
COL25A1-204ENST00000494183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL25A1-204ENST00000494183 KLHL29Q96CT2 875 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms