RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 TAS1R3Q7RTX0 852 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 PPFIBP1Q86W92 1011 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 RNF168Q8IYW5 571 aaPredicted RBP16.49■□□□□ 0.23
TOM1-215ENST00000491987 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 CALML4Q96GE6 196 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 B3GALT6Q96L58 329 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 TIPINQ9BVW5 301 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 ADAM7Q9H2U9 754 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 TMEM134Q9H6X4 195 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 ARHGAP28Q9P2N2 729 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 TNFSF13BQ9Y275 285 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 C5orf42Q9H799 3197 aa16.49■□□□□ 0.23
TOM1-215ENST00000491987 NPHP3-ACAD11A0A0J9YXS1 232 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 TADA2AO75478 443 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 THP07101 528 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 LONP1P36776 959 aaKnown RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 ITIH3Q06033 890 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 RESTQ13127 1097 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 TUSC3Q13454 348 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 HSP90AA2PQ14568 343 aaPredicted RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 ZNF568Q3ZCX4 644 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 KIAA1841Q6NSI8 718 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 APBB1IPQ7Z5R6 666 aaPredicted RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 HASPINQ8TF76 798 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 MRPL4Q9BYD3 311 aaKnown RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 GPR62Q9BZJ7 368 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 CDT1Q9H211 546 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 POMKQ9H5K3 350 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 C17orf75Q9HAS0 396 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 ADAM28Q9UKQ2 775 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 SSX2IPQ9Y2D8 614 aa16.48■□□□□ 0.23
TOM1-215ENST00000491987 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
TOM1-215ENST00000491987 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
TOM1-215ENST00000491987 SLC26A4O43511 780 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 PLS3P13797 630 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 SYT1P21579 422 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 DSG1Q02413 1049 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 DHX8Q14562 1220 aaKnown RBP16.47■□□□□ 0.23
TOM1-215ENST00000491987 NAB2Q15742 525 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
TOM1-215ENST00000491987 GLRA4Q5JXX5 417 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 KIAA0319Q5VV43 1072 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 FAM173BQ6P4H8 233 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 ZBTB33Q86T24 672 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 CEP120Q8N960 986 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 RASSF8Q8NHQ8 419 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 FEZF2Q8TBJ5 459 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 LRRC15Q8TF66 581 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 RIPOR3Q96MK2 946 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 CHST7Q9NS84 486 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 CLIC4Q9Y696 253 aa16.47■□□□□ 0.23
TOM1-215ENST00000491987 TEX28O15482 410 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 KIF4AO95239 1232 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 PLCG1P19174 1290 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 GRM5P41594 1212 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 MTHFRP42898 656 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 OSTNP61366 133 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
TOM1-215ENST00000491987 USP41Q3LFD5 358 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 ARSHQ5FYA8 562 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 TMC5Q6UXY8 1006 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 INTS4Q96HW7 963 aaKnown RBP16.46■□□□□ 0.23
TOM1-215ENST00000491987 NECTIN4Q96NY8 510 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 NTPCRQ9BSD7 190 aaKnown RBP16.46■□□□□ 0.23
TOM1-215ENST00000491987 TCHPQ9BT92 498 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.23
TOM1-215ENST00000491987 SFXN1Q9H9B4 322 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 RXFP1Q9HBX9 757 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 PTPRHQ9HD43 1115 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 KCND2Q9NZV8 630 aa16.46■□□□□ 0.23
TOM1-215ENST00000491987 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.226e-10■■■■■ 187.2
TOM1-215ENST00000491987 PRR33A8MZF0 331 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 ADH1AP07327 375 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 MYBP10242 640 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 HARSP12081 509 aaKnown RBP16.45■□□□□ 0.22
TOM1-215ENST00000491987 SMTNP53814 917 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 YARSP54577 528 aaKnown RBP16.45■□□□□ 0.22
TOM1-215ENST00000491987 STRN3Q13033 797 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 PTPAQ15257 358 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 MPZL3Q6UWV2 235 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 GLYCTKQ8IVS8 523 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 TMEM161BQ8NDZ6 487 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 RIN2Q8WYP3 895 aaPredicted RBP16.45■□□□□ 0.22
TOM1-215ENST00000491987 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 MAN1C1Q9NR34 630 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 BLOC1S4Q9NUP1 217 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
TOM1-215ENST00000491987 NR2E1Q9Y466 385 aa16.45■□□□□ 0.22
TOM1-215ENST00000491987 PLXNA3P51805 1871 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 ABLIM1O14639 778 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 GLUD1P00367 558 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms