RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ITIH3Q06033 890 aa34.49■■■■□ 3.11
LDB1-204ENST00000490751 APBB1IPQ7Z5R6 666 aaPredicted RBP34.49■■■■□ 3.11
LDB1-204ENST00000490751 SSX2IPQ9Y2D8 614 aa34.49■■■■□ 3.11
LDB1-204ENST00000490751 RBM19Q9Y4C8 960 aaKnown RBP34.49■■■■□ 3.11
LDB1-204ENST00000490751 SLC26A4O43511 780 aa34.48■■■■□ 3.11
LDB1-204ENST00000490751 GRIN1Q05586 938 aa34.48■■■■□ 3.11
LDB1-204ENST00000490751 RARS2Q5T160 578 aaKnown RBP34.48■■■■□ 3.11
LDB1-204ENST00000490751 FUT10Q6P4F1 479 aa34.48■■■■□ 3.11
LDB1-204ENST00000490751 TAS1R3Q7RTX0 852 aa34.48■■■■□ 3.11
LDB1-204ENST00000490751 C12orf76Q8N812 135 aaPredicted RBP34.48■■■■□ 3.11
LDB1-204ENST00000490751 CALML4Q96GE6 196 aa34.48■■■■□ 3.11
LDB1-204ENST00000490751 MRPL4Q9BYD3 311 aaKnown RBP34.48■■■■□ 3.11
LDB1-204ENST00000490751 DAXXQ9UER7 740 aaPredicted RBP34.48■■■■□ 3.11
LDB1-204ENST00000490751 ADAM28Q9UKQ2 775 aa34.48■■■■□ 3.11
LDB1-204ENST00000490751 SLC16A4O15374 487 aa34.47■■■■□ 3.11
LDB1-204ENST00000490751 THP07101 528 aa34.47■■■■□ 3.11
LDB1-204ENST00000490751 SYT1P21579 422 aa34.47■■■■□ 3.11
LDB1-204ENST00000490751 CLCN4P51793 760 aa34.47■■■■□ 3.11
LDB1-204ENST00000490751 INTS4Q96HW7 963 aaKnown RBP34.47■■■■□ 3.11
LDB1-204ENST00000490751 ACO2Q99798 780 aaKnown RBP34.47■■■■□ 3.11
LDB1-204ENST00000490751 PAAF1Q9BRP4 392 aa34.47■■■■□ 3.11
LDB1-204ENST00000490751 KCND2Q9NZV8 630 aa34.47■■■■□ 3.11
LDB1-204ENST00000490751 CASTOR2A6NHX0 329 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 LONP1P36776 959 aaKnown RBP34.46■■■■□ 3.11
LDB1-204ENST00000490751 HSP90AA2PQ14568 343 aaPredicted RBP34.46■■■■□ 3.11
LDB1-204ENST00000490751 HERC4Q5GLZ8 1057 aaPredicted RBP34.46■■■■□ 3.11
LDB1-204ENST00000490751 KIAA0319Q5VV43 1072 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 KIAA1841Q6NSI8 718 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 KANK3Q6NY19 840 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 FBXL18Q96ME1 805 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 TARS2Q9BW92 718 aaKnown RBP34.46■■■■□ 3.11
LDB1-204ENST00000490751 GPR62Q9BZJ7 368 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 CDT1Q9H211 546 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 RAPGEFL1Q9UHV5 662 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 PLXNA3P51805 1871 aa34.46■■■■□ 3.11
LDB1-204ENST00000490751 TRIP11Q15643 1979 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 K7ELQ4 463 aaPredicted RBP34.45■■■■□ 3.11
LDB1-204ENST00000490751 PLS3P13797 630 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 DSG1Q02413 1049 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 ZNF568Q3ZCX4 644 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 SPIRE2Q8WWL2 714 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 B3GALT6Q96L58 329 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 NECTIN4Q96NY8 510 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 NTPCRQ9BSD7 190 aaKnown RBP34.45■■■■□ 3.11
LDB1-204ENST00000490751 CHST7Q9NS84 486 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 FOXD4L1Q9NU39 408 aa34.45■■■■□ 3.11
LDB1-204ENST00000490751 NPHP3-ACAD11A0A0J9YXS1 232 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 TADA2AO75478 443 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 WEE2P0C1S8 567 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 CACNB1Q02641 598 aaPredicted RBP34.44■■■■□ 3.1
LDB1-204ENST00000490751 RESTQ13127 1097 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 NAB2Q15742 525 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 CEP120Q8N960 986 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 LRRC15Q8TF66 581 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 POMKQ9H5K3 350 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 PTPRHQ9HD43 1115 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 CLIC4Q9Y696 253 aa34.44■■■■□ 3.1
LDB1-204ENST00000490751 TEX28O15482 410 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 ADH1AP07327 375 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 SP100P23497 879 aaPredicted RBP34.43■■■■□ 3.1
LDB1-204ENST00000490751 MTHFRP42898 656 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 KARSQ15046 597 aaKnown RBP34.43■■■■□ 3.1
LDB1-204ENST00000490751 USP41Q3LFD5 358 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 ARSHQ5FYA8 562 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 RASSF8Q8NHQ8 419 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 HASPINQ8TF76 798 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 RIPOR3Q96MK2 946 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 RXFP1Q9HBX9 757 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 KCNG1Q9UIX4 513 aa34.43■■■■□ 3.1
LDB1-204ENST00000490751 SF3B1O75533 1304 aaKnown RBP eCLIP34.42■■■■□ 3.1
LDB1-204ENST00000490751 SPDYE4A6NLX3 237 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 PLCG1P19174 1290 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 GRM5P41594 1212 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 SMTNP53814 917 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 GLRA4Q5JXX5 417 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 ZBTB33Q86T24 672 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 TMEM161BQ8NDZ6 487 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 SFXN1Q9H9B4 322 aa34.42■■■■□ 3.1
LDB1-204ENST00000490751 PRR33A8MZF0 331 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 KIF4AO95239 1232 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 STRN3Q13033 797 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 DHX8Q14562 1220 aaKnown RBP34.41■■■■□ 3.1
LDB1-204ENST00000490751 PTPAQ15257 358 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 FAM173BQ6P4H8 233 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 TMC5Q6UXY8 1006 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 GPBP1Q86WP2 473 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 TCHPQ9BT92 498 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 CCDC94Q9BW85 323 aaPredicted RBP34.41■■■■□ 3.1
LDB1-204ENST00000490751 BLOC1S4Q9NUP1 217 aa34.41■■■■□ 3.1
LDB1-204ENST00000490751 PROZP22891 400 aa34.4■■■■□ 3.1
LDB1-204ENST00000490751 OSTNP61366 133 aa34.4■■■■□ 3.1
LDB1-204ENST00000490751 RIN2Q8WYP3 895 aaPredicted RBP34.4■■■■□ 3.1
LDB1-204ENST00000490751 PPP1R10Q96QC0 940 aaKnown RBP34.4■■■■□ 3.1
LDB1-204ENST00000490751 REEP2Q9BRK0 252 aa34.4■■■■□ 3.1
LDB1-204ENST00000490751 TSHZ2Q9NRE2 1034 aa34.4■■■■□ 3.1
LDB1-204ENST00000490751 LARSQ9P2J5 1176 aaKnown RBP34.4■■■■□ 3.1
LDB1-204ENST00000490751 ABLIM1O14639 778 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 MAPTP10636 758 aaKnown RBP34.39■■■■□ 3.1
LDB1-204ENST00000490751 MCF2P10911 925 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 YARSP54577 528 aaKnown RBP34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms