RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 SEPT2Q15019 361 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 FNDC7Q5VTL7 733 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 ZNF276Q8N554 614 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 C1orf162Q8NEQ5 155 aaPredicted RBP6.4□□□□□ -1.38
VPS8-224ENST00000488255 OR10H5Q8NGA6 315 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 CCHCR1Q8TD31 782 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 ZNF483Q8TF39 744 aaPredicted RBP6.4□□□□□ -1.38
VPS8-224ENST00000488255 CLIP3Q96DZ5 547 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 PDCD2LQ9BRP1 358 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 NRDE2Q9H7Z3 1164 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 ING1Q9UK53 422 aaPredicted RBP6.4□□□□□ -1.38
VPS8-224ENST00000488255 TBKBP1A7MCY6 615 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 RECQL4O94761 1208 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 SREBF1P36956 1147 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 FLT3LGP49771 235 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 RNASE9P60153 205 aaKnown RBP6.39□□□□□ -1.39
VPS8-224ENST00000488255 ABHD18Q0P651 414 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 KLF10Q13118 480 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 PCBP2Q15366 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS8-224ENST00000488255 CSRP2Q16527 193 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 HTR3DQ70Z44 454 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 GPRIN1Q7Z2K8 1008 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS8-224ENST00000488255 OR2I1PQ8NGU4 316 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 NRG4Q8WWG1 115 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 NEU4Q8WWR8 484 aaPredicted RBP6.39□□□□□ -1.39
VPS8-224ENST00000488255 JADE3Q92613 823 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 FAXDC2Q96IV6 333 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 NDC1Q9BTX1 674 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 ZNF768Q9H5H4 540 aaKnown RBP6.39□□□□□ -1.39
VPS8-224ENST00000488255 LANCL2Q9NS86 450 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 TRPM5Q9NZQ8 1165 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 AJAP1Q9UKB5 411 aaPredicted RBP6.39□□□□□ -1.39
VPS8-224ENST00000488255 INTUQ9ULD6 942 aa6.39□□□□□ -1.39
VPS8-224ENST00000488255 ANKRD62A6NC57 917 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 CXorf49A8MYA2 514 aaPredicted RBP6.38□□□□□ -1.39
VPS8-224ENST00000488255 MCM7P33993 719 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 ACVRL1P37023 503 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 NHLH2Q02577 135 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 INAVAQ3KP66 663 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 FAM47AQ5JRC9 791 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 AFMIDQ63HM1 303 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 NAIF1Q69YI7 327 aaPredicted RBP6.38□□□□□ -1.39
VPS8-224ENST00000488255 PNMA8AQ86V59 439 aaPredicted RBP6.38□□□□□ -1.39
VPS8-224ENST00000488255 SYT12Q8IV01 421 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 SLC25A43Q8WUT9 341 aaPredicted RBP6.38□□□□□ -1.39
VPS8-224ENST00000488255 KCNH6Q9H252 994 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 ZNF277Q9NRM2 450 aaPredicted RBP6.38□□□□□ -1.39
VPS8-224ENST00000488255 CLCA2Q9UQC9 943 aa6.38□□□□□ -1.39
VPS8-224ENST00000488255 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
VPS8-224ENST00000488255 KLHL33A6NCF5 533 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 TRIM75PA6NK02 468 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 GRXCR1A8MXD5 290 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 GABRDO14764 452 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PCDHGA12O60330 932 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 NDUFS2O75306 463 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 ENDOD1O94919 500 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 FPR1P21462 350 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 CLRN1P58418 232 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 FHL2Q14192 279 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PTPROQ16827 1216 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 BMT2Q1RMZ1 405 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 ATXN7L2Q5T6C5 722 aaPredicted RBP6.37□□□□□ -1.39
VPS8-224ENST00000488255 ZNF572Q7Z3I7 529 aaPredicted RBP6.37□□□□□ -1.39
VPS8-224ENST00000488255 RHOT1Q8IXI2 618 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 ZFP28Q8NHY6 868 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 ZCRB1Q8TBF4 217 aaKnown RBP6.37□□□□□ -1.39
VPS8-224ENST00000488255 HOXB13Q92826 284 aaPredicted RBP6.37□□□□□ -1.39
VPS8-224ENST00000488255 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS8-224ENST00000488255 C7orf25Q9BPX7 421 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 MRI1Q9BV20 369 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 TUBD1Q9UJT1 453 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 SIK3Q9Y2K2 1263 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PCDHGA9Q9Y5G4 932 aaKnown RBP6.37□□□□□ -1.39
VPS8-224ENST00000488255 PCDHGA8Q9Y5G5 932 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PCDHGA7Q9Y5G6 932 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PCDHGA6Q9Y5G7 932 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 PCDHGA3Q9Y5H0 932 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 MRFAP1Q9Y605 127 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
VPS8-224ENST00000488255 WASHC2CQ9Y4E1 1318 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 AHRRA9YTQ3 701 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 ALG1L2C9J202 215 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 SLPIP03973 132 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 ADH4P08319 380 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 ALOX15P16050 662 aaPredicted RBP6.36□□□□□ -1.39
VPS8-224ENST00000488255 MAKP20794 623 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 C5AR1P21730 350 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 CCND1P24385 295 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 ALDH1A3P47895 512 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 SLC6A9P48067 706 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 CHN2P52757 468 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 FAM189BP81408 668 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 MGAT2Q10469 447 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 METTL24Q5JXM2 366 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS8-224ENST00000488255 MYOCQ99972 504 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 TEX101Q9BY14 249 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms