RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 HSD17B14Q9BPX1 270 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 ANKEF1Q9NU02 776 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 PDRG1Q9NUG6 133 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 PARP2Q9UGN5 583 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 TADA2AO75478 443 aa21.58■■□□□ 1.05
SMPDL3A-202ENST00000487215 PAAF1Q9BRP4 392 aa21.58■■□□□ 1.05
SMPDL3A-202ENST00000487215 FOXQ1Q9C009 403 aa21.58■■□□□ 1.05
SMPDL3A-202ENST00000487215 FBXW11Q9UKB1 542 aa21.58■■□□□ 1.05
SMPDL3A-202ENST00000487215 SF3B1O75533 1304 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 MTCL1Q9Y4B5 1905 aaKnown RBP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 A0A1B0GUA9 196 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 SP9P0CG40 484 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 FSHRP23945 695 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 RARRES1P49788 294 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 NR5A1Q13285 461 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 HSP90AA2PQ14568 343 aaPredicted RBP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 GRASPQ7Z6J2 395 aaPredicted RBP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 PJA1Q8NG27 643 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 RMDN1Q96DB5 314 aa21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 RPP25Q9BUL9 199 aaKnown RBP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 POLR3FQ9H1D9 316 aaPredicted RBP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 ZFP37Q9Y6Q3 630 aaPredicted RBP21.57■■□□□ 1.04
SMPDL3A-202ENST00000487215 GLULP15104 373 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 NTHL1P78549 312 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 PARM1Q6UWI2 310 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 C1orf210Q8IVY1 113 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 KIAA2013Q8IYS2 634 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 HASPINQ8TF76 798 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 FGF14Q92915 247 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 CCDC43Q96MW1 224 aaKnown RBP21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 PCDHA12Q9UN75 941 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 ZNF292O60281 2723 aa21.56■■□□□ 1.04
SMPDL3A-202ENST00000487215 CASTOR2A6NHX0 329 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 POTEMA6NI47 508 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 KIF4AO95239 1232 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 STARD6P59095 220 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 GPC5P78333 572 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 TUSC3Q13454 348 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 LIN9Q5TKA1 542 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 ZC3H14Q6PJT7 736 aaKnown RBP21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 PIGOQ8TEQ8 1089 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 PIK3R5Q8WYR1 880 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 TNFRSF25Q93038 417 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 CLSTN3Q9BQT9 956 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 TTPALQ9BTX7 342 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 CDH7Q9ULB5 785 aa21.55■■□□□ 1.04
SMPDL3A-202ENST00000487215 A0A087WWV3 80 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 USO1O60763 962 aaKnown RBP21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 PFKFB2O60825 505 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 LRRN2O75325 713 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 CTDNEP1O95476 244 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 C8AP07357 584 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 HNRNPA1P09651 372 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 KRT2P35908 639 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 PSMD5Q16401 504 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 CALCRLQ16602 461 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 FAM171A1Q5VUB5 890 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 PPP4R3CPQ6ZMV5 832 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 LNX1Q8TBB1 728 aaPredicted RBP21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 TTC12Q9H892 705 aaPredicted RBP21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 GPRC5CQ9NQ84 441 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 ORC3Q9UBD5 711 aaPredicted RBP21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 TPCN1Q9ULQ1 816 aa21.54■■□□□ 1.04
SMPDL3A-202ENST00000487215 CACNA1AO00555 2505 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 LRRIQ4A6NIV6 560 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 PTGESO14684 152 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 PPM1LQ5SGD2 360 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 MAEAQ7L5Y9 396 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 CEP57Q86XR8 500 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 MAML2Q8IZL2 1156 aaPredicted RBP21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 SHDQ96IW2 340 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 PRIMPOLQ96LW4 560 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 HINFPQ9BQA5 517 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 PRMT7Q9NVM4 692 aaPredicted RBP21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 COL4A3Q01955 1670 aa21.53■■□□□ 1.04
SMPDL3A-202ENST00000487215 TTLL13PA6NNM8 815 aa21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 ADAM12O43184 909 aa21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 HOXA9P31269 272 aa21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 SNW1Q13573 536 aaKnown RBP21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 CDCA2Q69YH5 1023 aaPredicted RBP21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 FGF13Q92913 245 aa21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 CXCL16Q9H2A7 254 aa21.52■■□□□ 1.04
SMPDL3A-202ENST00000487215 EP300Q09472 2414 aaPredicted RBP21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 DMXL1Q9Y485 3027 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 MED19A0JLT2 244 aaPredicted RBP21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 WNT7AO00755 349 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 CCL16O15467 120 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 TXKP42681 527 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 NAB2Q15742 525 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 MTSS1LQ765P7 747 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 ITFG1Q8TB96 612 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 WASF1Q92558 559 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 RUBCNQ92622 972 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 DDX23Q9BUQ8 820 aaKnown RBP21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 FZD8Q9H461 694 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 PDZD7Q9H5P4 517 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 BRMS1Q9HCU9 246 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 SNTG2Q9NY99 539 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 POLIQ9UNA4 740 aa21.51■■□□□ 1.03
SMPDL3A-202ENST00000487215 KANSL1LA0AUZ9 987 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms