RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 RGL1Q9NZL6 768 aa7.17□□□□□ -1.26
CTDSPL-208ENST00000486978 WRAP73Q9P2S5 460 aaPredicted RBP7.17□□□□□ -1.26
CTDSPL-208ENST00000486978 PUF60Q9UHX1 559 aaKnown RBP7.17□□□□□ -1.26
CTDSPL-208ENST00000486978 PCDHA12Q9UN75 941 aa7.17□□□□□ -1.26
CTDSPL-208ENST00000486978 PPME1Q9Y570 386 aa7.17□□□□□ -1.26
CTDSPL-208ENST00000486978 PCDHGA2Q9Y5H1 932 aa7.17□□□□□ -1.26
CTDSPL-208ENST00000486978 LAMTOR5O43504 91 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 GAS2O43903 313 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 TBC1D4O60343 1298 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 DARSP14868 501 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 LAG3P18627 525 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ATP2B1P20020 1258 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 YWHABP31946 246 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 MCM7P33993 719 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 RFC5P40937 340 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 TXKP42681 527 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 POLGP54098 1239 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 NPEPPSP55786 919 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 GPC5P78333 572 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 CYP4A11Q02928 519 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 SRSF5Q13243 272 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ORC2Q13416 577 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 DRP2Q13474 957 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 SNW1Q13573 536 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 GNL2Q13823 731 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 DSC3Q14574 896 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 CCDC149Q6ZUS6 474 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ZNF410Q86VK4 478 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 TPH2Q8IWU9 490 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 EXOC8Q8IYI6 725 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 PDCD7Q8N8D1 485 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 NLRP7Q8WX94 980 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ZNF668Q96K58 619 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 CEP170P1Q96L14 293 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 TBC1D32Q96NH3 1257 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 BBC3Q96PG8 261 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 MTMR9Q96QG7 549 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 EIF2AK1Q9BQI3 630 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 DDX23Q9BUQ8 820 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 GCOM2Q9BZD3 368 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 DHX33Q9H6R0 707 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ELAC1Q9H777 363 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ZSWIM4Q9H7M6 989 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 TTC12Q9H892 705 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 SPG21Q9NZD8 308 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 SUCLA2Q9P2R7 463 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 EPS15L1Q9UBC2 864 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 KIF3AQ9Y496 699 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 NOTCH4Q99466 2003 aa7.16□□□□□ -1.26
CTDSPL-208ENST00000486978 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 GIPC1O14908 333 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 SLITRK3O94933 977 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 LYPLA2O95372 231 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 ZSCAN20P17040 1043 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 FGFR4P22455 802 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 SFPQP23246 707 aaKnown RBP eCLIP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 GBP2P32456 591 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 TRAPPC10P48553 1259 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 MCM2P49736 904 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 CTTNQ14247 550 aaKnown RBP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 XKR9Q5GH70 373 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 CLLU1OSQ5K130 101 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 TTC38Q5R3I4 469 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 CABP7Q86V35 215 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 RHPN2Q8IUC4 686 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 NOSTRINQ8IVI9 506 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 VPS52Q8N1B4 723 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 TCP11Q8WWU5 503 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 GATA6Q92908 595 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 TMX3Q96JJ7 454 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 NLRP4Q96MN2 994 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 ZNF558Q96NG5 402 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 HSD17B14Q9BPX1 270 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 INO80BQ9C086 356 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 TMEM60Q9H2L4 133 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 ATP6V0A4Q9HBG4 840 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 DZANK1Q9NVP4 752 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 TMEM161AQ9NX61 479 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 NOL7Q9UMY1 257 aaKnown RBP7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 COL4A3BPQ9Y5P4 624 aa7.15□□□□□ -1.26
CTDSPL-208ENST00000486978 ARID2Q68CP9 1835 aa7.15□□□□□ -1.27
CTDSPL-208ENST00000486978 A0A087WZ62 844 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 KANSL1LA0AUZ9 987 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 FAM170BA6NMN3 283 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 ANHXE9PGG2 379 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 ZBTB39O15060 712 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 HOXA2O43364 376 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 HRO43593 1189 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 B4GALT3O60512 393 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 CSDE1O75534 798 aaKnown RBP7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 RFPL2O75678 378 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 KCNK5O95279 499 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 CD2BP2O95400 341 aaKnown RBP7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 OR52Z1P0C646 297 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 U2AF2P26368 475 aaKnown RBP eCLIP7.14□□□□□ -1.272e-7■□□□□ 9.7
CTDSPL-208ENST00000486978 CLCN4P51793 760 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 KRT17Q04695 432 aa7.14□□□□□ -1.27
CTDSPL-208ENST00000486978 MTAPQ13126 283 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms