RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 SPECC1Q5M775 1068 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 DCLRE1AQ6PJP8 1040 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 ZC3H14Q6PJT7 736 aaKnown RBP22.23■■□□□ 1.15
PHF1-208ENST00000486845 WASF1Q92558 559 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 BRMS1Q9HCU9 246 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 KLK14Q9P0G3 267 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 NUMBLQ9Y6R0 609 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 R4GN57 208 aa22.23■■□□□ 1.15
PHF1-208ENST00000486845 DCNP07585 359 aaKnown RBP22.22■■□□□ 1.15
PHF1-208ENST00000486845 RARRES1P49788 294 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 TUSC3Q13454 348 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 CALCRLQ16602 461 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 CDR2LQ86X02 465 aaPredicted RBP22.22■■□□□ 1.15
PHF1-208ENST00000486845 RABGGTAQ92696 567 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 POLR3FQ9H1D9 316 aaPredicted RBP22.22■■□□□ 1.15
PHF1-208ENST00000486845 DLGAP2Q9P1A6 1054 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 FBXW11Q9UKB1 542 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 DCHS1Q96JQ0 3298 aa22.22■■□□□ 1.15
PHF1-208ENST00000486845 FAM205CA6NFA0 338 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 PFKFB2O60825 505 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 HNRNPA1P09651 372 aaKnown RBP eCLIP22.21■■□□□ 1.15
PHF1-208ENST00000486845 KRT2P35908 639 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 RTP2Q5QGT7 225 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 LIN9Q5TKA1 542 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 POTEGQ6S5H5 508 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 PRSS55Q6UWB4 352 aaPredicted RBP22.21■■□□□ 1.15
PHF1-208ENST00000486845 SHDQ96IW2 340 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 PRIMPOLQ96LW4 560 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 TTPALQ9BTX7 342 aa22.21■■□□□ 1.15
PHF1-208ENST00000486845 PRMT7Q9NVM4 692 aaPredicted RBP22.21■■□□□ 1.15
PHF1-208ENST00000486845 ORC3Q9UBD5 711 aaPredicted RBP22.21■■□□□ 1.15
PHF1-208ENST00000486845 LRRIQ4A6NIV6 560 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 NR5A1Q13285 461 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 PPP4R3CPQ6ZMV5 832 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 C1orf210Q8IVY1 113 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 PJA1Q8NG27 643 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 PIK3R5Q8WYR1 880 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 TTC12Q9H892 705 aaPredicted RBP22.2■■□□□ 1.14
PHF1-208ENST00000486845 CDH7Q9ULB5 785 aa22.2■■□□□ 1.14
PHF1-208ENST00000486845 USO1O60763 962 aaKnown RBP22.19■■□□□ 1.14
PHF1-208ENST00000486845 SP9P0CG40 484 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 XRCC6P12956 609 aaKnown RBP eCLIP22.19■■□□□ 1.14
PHF1-208ENST00000486845 HOXA9P31269 272 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 PSMD5Q16401 504 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 PPM1LQ5SGD2 360 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 GRASPQ7Z6J2 395 aaPredicted RBP22.19■■□□□ 1.14
PHF1-208ENST00000486845 PIGOQ8TEQ8 1089 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 TNFRSF25Q93038 417 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 PAAF1Q9BRP4 392 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 CACNG4Q9UBN1 327 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 TPCN1Q9ULQ1 816 aa22.19■■□□□ 1.14
PHF1-208ENST00000486845 CASTOR2A6NHX0 329 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 NEMFO60524 1076 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 XYLBO75191 536 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 STARD6P59095 220 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 ELAVL2Q12926 359 aaKnown RBP22.18■■□□□ 1.14
PHF1-208ENST00000486845 FAM171A1Q5VUB5 890 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 PDXDC1Q6P996 788 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 MTSS1LQ765P7 747 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 ZBTB8OSQ8IWT0 167 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 HASPINQ8TF76 798 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 CLSTN3Q9BQT9 956 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 FANCMQ8IYD8 2048 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 MYH15Q9Y2K3 1946 aa22.18■■□□□ 1.14
PHF1-208ENST00000486845 N4BP3O15049 544 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 KIF4AO95239 1232 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 CTDNEP1O95476 244 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 C8AP07357 584 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 TXKP42681 527 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 FAM187BQ17R55 369 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 CDCA2Q69YH5 1023 aaPredicted RBP22.17■■□□□ 1.14
PHF1-208ENST00000486845 PARM1Q6UWI2 310 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 CEP57Q86XR8 500 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 MCPH1Q8NEM0 835 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 ST13P5Q8NFI4 369 aaPredicted RBP22.17■■□□□ 1.14
PHF1-208ENST00000486845 LNX1Q8TBB1 728 aaPredicted RBP22.17■■□□□ 1.14
PHF1-208ENST00000486845 FGF14Q92915 247 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 HINFPQ9BQA5 517 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 FOXQ1Q9C009 403 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 GPRC5CQ9NQ84 441 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 DOCK6Q96HP0 2047 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 OTOGLQ3ZCN5 2332 aa22.17■■□□□ 1.14
PHF1-208ENST00000486845 DTNBO60941 627 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 THP07101 528 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 GPC5P78333 572 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 NTHL1P78549 312 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 TMEM132AQ24JP5 1023 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 MAEAQ7L5Y9 396 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 KIAA2013Q8IYS2 634 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 RMDN1Q96DB5 314 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 RPP25Q9BUL9 199 aaKnown RBP22.16■■□□□ 1.14
PHF1-208ENST00000486845 C2orf40Q9H1Z8 148 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 FZD8Q9H461 694 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 MIA3Q5JRA6 1907 aa22.16■■□□□ 1.14
PHF1-208ENST00000486845 KANSL1LA0AUZ9 987 aa22.15■■□□□ 1.14
PHF1-208ENST00000486845 PTGESO14684 152 aa22.15■■□□□ 1.14
PHF1-208ENST00000486845 CCL16O15467 120 aa22.15■■□□□ 1.14
PHF1-208ENST00000486845 POU2F2P09086 479 aa22.15■■□□□ 1.14
PHF1-208ENST00000486845 ANKRD1Q15327 319 aa22.15■■□□□ 1.14
PHF1-208ENST00000486845 RUBCNQ92622 972 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms