RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 KLHDC7AQ5VTJ3 777 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 SFMBT2Q5VUG0 894 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 KRT39Q6A163 491 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 TSHZ1Q6ZSZ6 1077 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 RSPH3Q86UC2 560 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 FMNL3Q8IVF7 1028 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 NME8Q8N427 588 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 ZSWIM2Q8NEG5 633 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 VTI1AQ96AJ9 217 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 ADPGKQ9BRR6 497 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 INTS2Q9H0H0 1204 aaKnown RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 TMEM8AQ9HCN3 771 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 NLRC4Q9NPP4 1024 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 RBAKQ9NYW8 714 aaPredicted RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 HDAC6Q9UBN7 1215 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 DDX20Q9UHI6 824 aaKnown RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 GINS2Q9Y248 185 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 USP20Q9Y2K6 914 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 LAMA3Q16787 3333 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 SOWAHDA6NJG2 315 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 LRRC53A6NM62 1247 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 LRRIQ3A6PVS8 624 aaPredicted RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 RNF225M0QZC1 329 aaPredicted RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 PMM2O15305 246 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 TREHO43280 583 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 MAP3K13O43283 966 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 INHAP05111 366 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 RPLP2P05387 115 aaKnown RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 ACTN1P12814 892 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 UCHL3P15374 230 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 TNNI1P19237 187 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 RFX1P22670 979 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 GRK4P32298 578 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 GCLMP48507 274 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 DLG4P78352 724 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 NKX3-2P78367 333 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 MCL1Q07820 350 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 RAPGEF1Q13905 1077 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 PSMD6Q15008 389 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 PCBP1Q15365 356 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTSA-208ENST00000485627 KCNA10Q16322 511 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 KYAT1Q16773 422 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 KIZQ2M2Z5 673 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 FAM47CQ5HY64 1035 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 TAF2Q6P1X5 1199 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 PDXDC1Q6P996 788 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 CXCL17Q6UXB2 119 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 TMEM139Q8IV31 216 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 CCDC170Q8IYT3 715 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 C17orf53Q8N3J3 647 aaPredicted RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 DNAJB3Q8WWF6 145 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 GANQ9H2C0 597 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 DEF6Q9H4E7 631 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 IFT122Q9HBG6 1241 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 HMX1Q9NP08 348 aaPredicted RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 RRAGDQ9NQL2 400 aaPredicted RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 SPTLC3Q9NUV7 552 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
CTSA-208ENST00000485627 FBXL5Q9UKA1 691 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 PLAGL2Q9UPG8 496 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 TNFSF13BQ9Y275 285 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
CTSA-208ENST00000485627 GOLGA6L9A6NEM1 432 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 EPHB6O15197 1021 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 ADAMTS4O75173 837 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CSDE1O75534 798 aaKnown RBP10.32□□□□□ -0.76
CTSA-208ENST00000485627 CABYRO75952 493 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 NOL4O94818 638 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 EDN1P05305 212 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 ASGR1P07306 291 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CCDC175P0C221 793 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CCDC172P0C7W6 258 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 MCF2P10911 925 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 FECHP22830 423 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CST5P28325 142 aaPredicted RBP10.32□□□□□ -0.76
CTSA-208ENST00000485627 CLCN1P35523 988 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 AP3M2P53677 418 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 ADAM17P78536 824 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CDK17Q00537 523 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 PPP3CAQ08209 521 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 TMEM62Q0P6H9 643 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 ASIC2Q16515 512 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 MEA1Q16626 185 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
CTSA-208ENST00000485627 MAP3K21Q5TCX8 1036 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 TRIM65Q6PJ69 517 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 RUFY4Q6ZNE9 571 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 Q7L0L9 218 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 BRSK2Q8IWQ3 736 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 THNSL1Q8IYQ7 743 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 CCAR2Q8N163 923 aaKnown RBP10.32□□□□□ -0.76
CTSA-208ENST00000485627 KLHDC9Q8NEP7 349 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 PPP1R13LQ8WUF5 828 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 BAP1Q92560 729 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 SYN2Q92777 582 aaPredicted RBP10.32□□□□□ -0.76
CTSA-208ENST00000485627 CCDC42Q96M95 316 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms