RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 CAPNS2Q96L46 248 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 TCHPQ9BT92 498 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 KATNAL1Q9BW62 490 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 CREBZFQ9NS37 354 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 RAB20Q9NX57 234 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 AJAP1Q9UKB5 411 aaPredicted RBP28.39■■■□□ 2.14
SHOX2-204ENST00000483851 AKT3Q9Y243 479 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 HAS3O00219 553 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 ABLIM1O14639 778 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 KPNA6O60684 536 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 DUSP11O75319 330 aaKnown RBP28.38■■■□□ 2.13
SHOX2-204ENST00000483851 DLATP10515 647 aaKnown RBP28.38■■■□□ 2.13
SHOX2-204ENST00000483851 ACOT2P49753 483 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 BRSK2Q8IWQ3 736 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 KAT2BQ92831 832 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 CASP8AP2Q9UKL3 1982 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 ATP8B3O60423 1300 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 PJA2O43164 708 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 FAM189A1O60320 539 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 POU5F1Q01860 360 aaKnown RBP28.38■■■□□ 2.13
SHOX2-204ENST00000483851 CYP27A1Q02318 531 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 ATF7IP2Q5U623 682 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 IRX2Q9BZI1 471 aaPredicted RBP28.38■■■□□ 2.13
SHOX2-204ENST00000483851 MRFAP1Q9Y605 127 aa28.38■■■□□ 2.13
SHOX2-204ENST00000483851 TADA3O75528 432 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 GJB1P08034 283 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 MAGEA1P43355 309 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 ARID5AQ03989 594 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 PTK2Q05397 1052 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 KIAA0753Q2KHM9 967 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 ERCC6LQ2NKX8 1250 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 ZACNQ401N2 412 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 POP1Q99575 1024 aaKnown RBP28.37■■■□□ 2.13
SHOX2-204ENST00000483851 CGRRF1Q99675 332 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 GPR88Q9GZN0 384 aa28.37■■■□□ 2.13
SHOX2-204ENST00000483851 UBE2TQ9NPD8 197 aaPredicted RBP28.37■■■□□ 2.13
SHOX2-204ENST00000483851 MBLAC1A4D2B0 266 aaPredicted RBP28.36■■■□□ 2.13
SHOX2-204ENST00000483851 MFSD10Q14728 455 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 KIF22Q14807 665 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 SRGAP1Q7Z6B7 1085 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 CNTNAP2Q9UHC6 1331 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 A0A087WZ62 844 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 SMIM10L2AP0DMW4 78 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 SMIM10L2BP0DMW5 78 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 CYBAP13498 195 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 TNNI1P19237 187 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 MFAP3P55082 362 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 GFPT1Q06210 699 aaPredicted RBP28.36■■■□□ 2.13
SHOX2-204ENST00000483851 BMS1Q14692 1282 aaKnown RBP28.36■■■□□ 2.13
SHOX2-204ENST00000483851 NFRKBQ6P4R8 1299 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 ENOSF1Q7L5Y1 443 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 KIAA0319LQ8IZA0 1049 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 LMBR1Q8WVP7 490 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 ZBTB10Q96DT7 871 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 NT5C1BQ96P26 610 aa28.36■■■□□ 2.13
SHOX2-204ENST00000483851 FDXACB1Q9BRP7 624 aaPredicted RBP28.36■■■□□ 2.13
SHOX2-204ENST00000483851 SMIM35A0A1B0GVV1 85 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 TTLL13PA6NNM8 815 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 EVI5O60447 810 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 C4BPAP04003 597 aaKnown RBP28.35■■■□□ 2.13
SHOX2-204ENST00000483851 FLT3LGP49771 235 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 PSEN2P49810 448 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 ZNF569Q5MCW4 686 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 ZNF571Q7Z3V5 609 aaPredicted RBP28.35■■■□□ 2.13
SHOX2-204ENST00000483851 TAS1R2Q8TE23 839 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 PDE11AQ9HCR9 933 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 SETD4Q9NVD3 440 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 CPSF3Q9UKF6 684 aaKnown RBP28.35■■■□□ 2.13
SHOX2-204ENST00000483851 GUCA1BQ9UMX6 200 aa28.35■■■□□ 2.13
SHOX2-204ENST00000483851 H2AFXP16104 143 aaPredicted RBP28.34■■■□□ 2.13
SHOX2-204ENST00000483851 PCBP1Q15365 356 aaKnown RBP eCLIP28.34■■■□□ 2.13
SHOX2-204ENST00000483851 FSCN1Q16658 493 aaKnown RBP28.34■■■□□ 2.13
SHOX2-204ENST00000483851 KYAT1Q16773 422 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 ZNF516Q92618 1163 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 SEMA4DQ92854 862 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 CARD6Q9BX69 1037 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 LACRTQ9GZZ8 138 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 MINDY3Q9H8M7 445 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 TOPORSQ9NS56 1045 aaPredicted RBP28.34■■■□□ 2.13
SHOX2-204ENST00000483851 NKX3-2P78367 333 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 SP3Q02447 781 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 TUBB2AQ13885 445 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 SMYD5Q6GMV2 418 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 ARHGEF19Q8IW93 802 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 TUBB2BQ9BVA1 445 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 ARHGAP39Q9C0H5 1083 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 ADAMTS1Q9UHI8 967 aa28.34■■■□□ 2.13
SHOX2-204ENST00000483851 A0A087X0T9 212 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 RCCD1A6NED2 376 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 EFCAB8A8MWE9 144 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 AOC2O75106 756 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 VTNP04004 478 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 FAM228BP0C875 321 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 GJA9P57773 515 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 ADAM17P78536 824 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 GCNT1Q02742 428 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 AMHR2Q16671 573 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 ZNF568Q3ZCX4 644 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 FBXO38Q6PIJ6 1188 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 WDR49Q8IV35 697 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms