RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 PCDH10Q9P2E7 1040 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 CPSF3Q9UKF6 684 aaKnown RBP22.59■■□□□ 1.21
VPS16-207ENST00000481812 GIT1Q9Y2X7 761 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 RALGAPA2Q2PPJ7 1873 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 TRIP11Q15643 1979 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 FGFR1OPO95684 399 aaKnown RBP22.58■■□□□ 1.21
VPS16-207ENST00000481812 ADRB2P07550 413 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 ITGA4P13612 1032 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 KCNJ6P48051 423 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 STX17P56962 302 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 CRELD2Q6UXH1 353 aaPredicted RBP22.58■■□□□ 1.21
VPS16-207ENST00000481812 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.58■■□□□ 1.21
VPS16-207ENST00000481812 PHOSPHO2Q8TCD6 241 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 TOP1MTQ969P6 601 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 ACAP3Q96P50 834 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 NXF3Q9H4D5 531 aaKnown RBP22.58■■□□□ 1.21
VPS16-207ENST00000481812 PCDHB7Q9Y5E2 793 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 PTPRSQ13332 1948 aa22.58■■□□□ 1.21
VPS16-207ENST00000481812 ZNF233A6NK53 670 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 RBAK-RBAKDNI3L0D1 243 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 HOXA2O43364 376 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 EXOC3O60645 756 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 HARSP12081 509 aaKnown RBP22.57■■□□□ 1.2
VPS16-207ENST00000481812 CYP2J2P51589 502 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 AGMOQ6ZNB7 445 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 LRRC55Q6ZSA7 311 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 FILIP1Q7Z7B0 1213 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 CEP120Q8N960 986 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 TSPAN18Q96SJ8 248 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 PLEKHA5Q9HAU0 1116 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 TOPORSQ9NS56 1045 aaPredicted RBP22.57■■□□□ 1.2
VPS16-207ENST00000481812 SNTG2Q9NY99 539 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 ANK1P16157 1881 aa22.57■■□□□ 1.2
VPS16-207ENST00000481812 INPPL1O15357 1258 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 ACOT2P49753 483 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 YARSP54577 528 aaKnown RBP22.56■■□□□ 1.2
VPS16-207ENST00000481812 MCCD1P59942 119 aaPredicted RBP22.56■■□□□ 1.2
VPS16-207ENST00000481812 ENPEPQ07075 957 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 SPATA1Q5VX52 437 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 CD302Q8IX05 232 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 CSGALNACT2Q8N6G5 542 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 NOC3LQ8WTT2 800 aaKnown RBP22.56■■□□□ 1.2
VPS16-207ENST00000481812 SAAL1Q96ER3 474 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 SLC9A7Q96T83 725 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 FAM213AQ9BRX8 229 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 RNF39Q9H2S5 420 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 RPF1Q9H9Y2 349 aaKnown RBP22.56■■□□□ 1.2
VPS16-207ENST00000481812 LRFN2Q9ULH4 789 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 FRMD4BQ9Y2L6 1034 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 HES2Q9Y543 173 aa22.56■■□□□ 1.2
VPS16-207ENST00000481812 ZBBXA8MT70 800 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 IKBKBO14920 756 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 SLC16A3O15427 465 aaKnown RBP22.55■■□□□ 1.2
VPS16-207ENST00000481812 RECQL4O94761 1208 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 PSMC2P35998 433 aaKnown RBP22.55■■□□□ 1.2
VPS16-207ENST00000481812 ZNF165P49910 485 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 SNRNP35Q16560 246 aaKnown RBP22.55■■□□□ 1.2
VPS16-207ENST00000481812 XKR4Q5GH76 650 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 ALKAL1Q6UXT8 129 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 BRSK2Q8IWQ3 736 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 TMEM192Q8IY95 271 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 ZSWIM2Q8NEG5 633 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 MFSD14AQ96MC6 490 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 UBE2OQ9C0C9 1292 aaKnown RBP22.55■■□□□ 1.2
VPS16-207ENST00000481812 RSAD1Q9HA92 442 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 SLC4A7Q9Y6M7 1214 aa22.55■■□□□ 1.2
VPS16-207ENST00000481812 PDCD11Q14690 1871 aaKnown RBP22.55■■□□□ 1.2
VPS16-207ENST00000481812 FNDC1Q4ZHG4 1894 aaPredicted RBP22.55■■□□□ 1.2
VPS16-207ENST00000481812 TTC26A0AVF1 554 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 GOLGA8IPA6NC78 632 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 GOLGA8JA6NMD2 632 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 IL18RAPO95256 599 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 GNA14O95837 355 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 TNFSF9P41273 254 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 CASP4P49662 377 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 OSTNP61366 133 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 DEFB103AP81534 67 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 MYL5Q02045 173 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 SURF1Q15526 300 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 ENOX2Q16206 610 aaKnown RBP22.54■■□□□ 1.2
VPS16-207ENST00000481812 SLC10A6Q3KNW5 377 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 ZBTB41Q5SVQ8 909 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 SRRTQ9BXP5 876 aaKnown RBP22.54■■□□□ 1.2
VPS16-207ENST00000481812 TSPY26PQ9H489 355 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 THAP9Q9H5L6 903 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 ASB7Q9H672 318 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 CXXC1Q9P0U4 656 aaPredicted RBP22.54■■□□□ 1.2
VPS16-207ENST00000481812 PARP2Q9UGN5 583 aa22.54■■□□□ 1.2
VPS16-207ENST00000481812 SMTNL1A8MU46 457 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 AKAP3O75969 853 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 AKAP5P24588 427 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 MARSP56192 900 aaKnown RBP22.53■■□□□ 1.2
VPS16-207ENST00000481812 SHHQ15465 462 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 TPD52L1Q16890 204 aaPredicted RBP22.53■■□□□ 1.2
VPS16-207ENST00000481812 SEZ6Q53EL9 994 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 CEP135Q66GS9 1140 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 CBWD2Q8IUF1 395 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 LPPQ93052 612 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 SNX27Q96L92 541 aa22.53■■□□□ 1.2
VPS16-207ENST00000481812 APOL6Q9BWW8 343 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms