RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 AKAP5P24588 427 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 OTOP3Q7RTS5 596 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 BSNDQ8WZ55 320 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 DDX19AQ9NUU7 478 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 CACNA1HO95180 2353 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 DOCK8Q8NF50 2099 aa13.38□□□□□ -0.27
SQSTM1-207ENST00000481335 A0A087WWV3 80 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 TEX28O15482 410 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 SSBP05455 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 THP07101 528 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 TOB1P50616 345 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 HSP90AA2PQ14568 343 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 TMC5Q6UXY8 1006 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 STAMQ92783 540 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 MAN1C1Q9NR34 630 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 KCND2Q9NZV8 630 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
SQSTM1-207ENST00000481335 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 C2CD2LO14523 706 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 SLC26A4O43511 780 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 RECQL4O94761 1208 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 NBR1Q14596 966 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 ECM1Q16610 540 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 HYIQ5T013 277 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 CDR2LQ86X02 465 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 C12orf76Q8N812 135 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 SNTG2Q9NY99 539 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 TNFSF13BQ9Y275 285 aa13.36□□□□□ -0.27
SQSTM1-207ENST00000481335 K7ERI5 159 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 PTGESO14684 152 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 TADA2AO75478 443 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 SP100P23497 879 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 GUCY2CP25092 1073 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 PTPN5P54829 565 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 NHLH1Q02575 133 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 ATF7IP2Q5U623 682 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 TAS1R1Q7RTX1 841 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 PIK3R5Q8WYR1 880 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 UROC1Q96N76 676 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 WDR6Q9NNW5 1121 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 TOPORSQ9NS56 1045 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 IGSF9Q9P2J2 1179 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-207ENST00000481335 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 H3BQV1 296 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 BMP15O95972 392 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 SCP2P22307 547 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 HOXA9P31269 272 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 NAB2Q15742 525 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 RTL10Q7L3V2 364 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 KCNN1Q92952 543 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 AK8Q96MA6 479 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 NTPCRQ9BSD7 190 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 TTPALQ9BTX7 342 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 MRPL4Q9BYD3 311 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 CLUHO75153 1309 aa13.34□□□□□ -0.27
SQSTM1-207ENST00000481335 CCDC195A0A1B0GUA6 201 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 CASTOR2A6NHX0 329 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 F8W810 466 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 TGM5O43548 720 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 HIP1RO75146 1068 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 KIF4AO95239 1232 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 BRD1O95696 1058 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 EDN1P05305 212 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 POU2F2P09086 479 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 WEE2P0C1S8 567 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 GJB2P29033 226 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 GRM5P41594 1212 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 NPTX2P47972 431 aa13.33□□□□□ -0.28
SQSTM1-207ENST00000481335 YARSP54577 528 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms