RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SUV39H1O43463 412 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 HTRA2O43464 458 aaPredicted RBP4.93□□□□□ -1.62
CBX3-207ENST00000481300 SLC26A4O43511 780 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 AP1G1O43747 822 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 CDC14BO60729 498 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 GASTP01350 101 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 POU2F2P09086 479 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 CR2P20023 1033 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 PDCP20941 246 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 COMTP21964 271 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 NPEPPSP55786 919 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 ACAP1Q15027 740 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 PRKD1Q15139 912 aaPredicted RBP4.93□□□□□ -1.62
CBX3-207ENST00000481300 GFOD2Q3B7J2 385 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 USP45Q70EL2 814 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 NOL8Q76FK4 1167 aaKnown RBP4.93□□□□□ -1.62
CBX3-207ENST00000481300 SHCBP1Q8NEM2 672 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 OR5M3Q8NGP4 307 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
CBX3-207ENST00000481300 RABGGTAQ92696 567 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 EDAQ92838 391 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 C8orf48Q96LL4 319 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 CDC5LQ99459 802 aaKnown RBP4.93□□□□□ -1.62
CBX3-207ENST00000481300 PCED1AQ9H1Q7 454 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 EPC1Q9H2F5 836 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 MANSC1Q9H8J5 431 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 BCO1Q9HAY6 547 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 GPRC5DQ9NZD1 345 aa4.93□□□□□ -1.62
CBX3-207ENST00000481300 A0A1W2PRX2 142 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 PRPF3O43395 683 aaKnown RBP4.92□□□□□ -1.62
CBX3-207ENST00000481300 ITGA10O75578 1167 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 RAD17O75943 681 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 CRHR1P34998 444 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 HMGA2P52926 109 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 KLF10Q13118 480 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 C3orf36Q3SXR2 165 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 PDZD4Q76G19 769 aaPredicted RBP4.92□□□□□ -1.62
CBX3-207ENST00000481300 EPM2AIP1Q7L775 607 aaPredicted RBP4.92□□□□□ -1.62
CBX3-207ENST00000481300 C14orf80Q86SX3 495 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 RSPH3Q86UC2 560 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 GRAMD1CQ8IYS0 662 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 CMTM4Q8IZR5 234 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 PQLC1Q8N2U9 271 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 OR7D4Q8NG98 312 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 CFHR4Q92496 578 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 ARL8AQ96BM9 186 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 MRIQ9BWK5 157 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 GTPBP4Q9BZE4 634 aaKnown RBP4.92□□□□□ -1.62
CBX3-207ENST00000481300 MSL2Q9HCI7 577 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 IL23AQ9NPF7 189 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 LANCL2Q9NS86 450 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 TDP1Q9NUW8 608 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 IPPQ9Y573 584 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 PCDHA13Q9Y5I0 950 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 HS3ST3A1Q9Y663 406 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 CFAP20Q9Y6A4 193 aaKnown RBP4.92□□□□□ -1.62
CBX3-207ENST00000481300 SLC30A1Q9Y6M5 507 aa4.92□□□□□ -1.62
CBX3-207ENST00000481300 PMS2P1A4D2B8 440 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 KIF3BO15066 747 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 ERC2O15083 957 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 PLSCR1O15162 318 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 LPOP22079 712 aaPredicted RBP4.91□□□□□ -1.62
CBX3-207ENST00000481300 EDNRBP24530 442 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 PTPN7P35236 360 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 CASRP41180 1078 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 RIN1Q13671 783 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 ZNF267Q14586 743 aaPredicted RBP4.91□□□□□ -1.62
CBX3-207ENST00000481300 SEPT2Q15019 361 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 PGS1Q32NB8 556 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 ARHGAP29Q52LW3 1261 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 RNF207Q6ZRF8 634 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 Q6ZVL8 140 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 DRC7Q8IY82 874 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 CAMKK1Q8N5S9 505 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 OR2I1PQ8NGU4 316 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 TTC8Q8TAM2 541 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 CCHCR1Q8TD31 782 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 HOXB13Q92826 284 aaPredicted RBP4.91□□□□□ -1.62
CBX3-207ENST00000481300 HPS3Q969F9 1004 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 MVB12AQ96EY5 273 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 CYFIP2Q96F07 1278 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 GPHA2Q96T91 129 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 TCF25Q9BQ70 676 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 PCGF6Q9BYE7 350 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 SENP6Q9GZR1 1112 aaPredicted RBP4.91□□□□□ -1.62
CBX3-207ENST00000481300 TMEM140Q9NV12 185 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 GEMIN8Q9NWZ8 242 aaKnown RBP4.91□□□□□ -1.62
CBX3-207ENST00000481300 TRPS1Q9UHF7 1281 aa4.91□□□□□ -1.62
CBX3-207ENST00000481300 ING1Q9UK53 422 aaPredicted RBP4.91□□□□□ -1.62
CBX3-207ENST00000481300 UBE2QL1A1L167 161 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 VSTM5A8MXK1 200 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 SGTAO43765 313 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 ACO1P21399 889 aaKnown RBP4.9□□□□□ -1.63
CBX3-207ENST00000481300 SREBF1P36956 1147 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 RPS19P39019 145 aaKnown RBP4.9□□□□□ -1.63
CBX3-207ENST00000481300 CDC42EP1Q00587 391 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 FOXE3Q13461 319 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 IL10RAQ13651 578 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 SAFB2Q14151 953 aaKnown RBP eCLIP4.9□□□□□ -1.63
CBX3-207ENST00000481300 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms