RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MASTLQ96GX5 879 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 BATF3Q9NR55 127 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 WDR35Q9P2L0 1181 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 MOSPD1Q9UJG1 213 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
VEGFA-212ENST00000480614 C3orf70A6NLC5 250 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-212ENST00000480614 DEFA1P59665 94 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 DEFA3P59666 94 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 LRRC8EQ6NSJ5 796 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 PKN3Q6P5Z2 889 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 GTF3C2Q8WUA4 911 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-212ENST00000480614 SLC38A7Q9NVC3 462 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 NRBP1Q9UHY1 535 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 PI4K2BG5E9Z4 385 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 UBXN2AP68543 259 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 RESTQ13127 1097 aa10.07□□□□□ -0.8
VEGFA-212ENST00000480614 RUNX1T1Q06455 604 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 SNX17Q15036 470 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 DNAL1Q4LDG9 190 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 BTBD8Q5XKL5 378 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 LCORLQ8N3X6 602 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 PLEKHA8Q96JA3 519 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ATP6V1G3Q96LB4 118 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 POLR3FQ9H1D9 316 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ALDH1A1P00352 501 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 SERPINB9P50453 376 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 PPP4R4Q6NUP7 873 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 RAPGEF5Q92565 580 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ACAD9Q9H845 621 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 USP6P35125 1406 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 FAM102AQ5T9C2 384 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 MMP19Q99542 508 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 H2AFJQ9BTM1 129 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 TBC1D23Q9NUY8 699 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 SNX24Q9Y343 169 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 UTYO14607 1347 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 WDR47O94967 919 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 GH2P01242 217 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 USP11P51784 963 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CCDC15Q0P6D6 951 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CMTM5Q96DZ9 223 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 SLC4A7Q9Y6M7 1214 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 TPI1P60174 286 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 GRM4Q14833 912 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CEP55Q53EZ4 464 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 GRAMD1CQ8IYS0 662 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 RCOR2Q8IZ40 523 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ECT2Q9H8V3 914 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 SNRNP48Q6IEG0 339 aaKnown RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 FBXO38Q6PIJ6 1188 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 USP6NLQ92738 828 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 MRPL1Q9BYD6 325 aaKnown RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 HMOX2P30519 316 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CAPZA2P47755 286 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 RGS4P49798 205 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ADRA2BP18089 450 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 NCKAP1LP55160 1127 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CALML6Q8TD86 181 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 DIABLOQ9NR28 239 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 UBXN8O00124 270 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 FCER1AP12319 257 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 PRKCQQ04759 706 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ERFEQ4G0M1 354 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CC2D1AQ6P1N0 951 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-212ENST00000480614 ATPAF2Q8N5M1 289 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 FAM161BQ96MY7 647 aa10.06□□□□□ -0.8
VEGFA-212ENST00000480614 CYBBP04839 570 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CYP2E1P05181 493 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TCF3P15923 654 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 DRAP1Q14919 205 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MTIF3Q9H2K0 278 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 SMARCAL1Q9NZC9 954 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 STK25O00506 426 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 SYTL3Q4VX76 610 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 PARP9Q8IXQ6 854 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ZCCHC11Q5TAX3 1644 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MYH1P12882 1939 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MYH2Q9UKX2 1941 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MYH4Q9Y623 1939 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 SNTNA6NMZ2 147 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MEFVO15553 781 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ALX1Q15699 326 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 PASD1Q8IV76 773 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CLCA2Q9UQC9 943 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms