RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PRG3Q9Y2Y8 225 aaPredicted RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 PCDHB2Q9Y5E7 798 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 NUMBLQ9Y6R0 609 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 MYH15Q9Y2K3 1946 aa7.4□□□□□ -1.23
VCP-205ENST00000479300 MIA3Q5JRA6 1907 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 TBX3O15119 743 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 MAFO75444 373 aaPredicted RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 PSMD10O75832 226 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 GLUD1P00367 558 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 SFPQP23246 707 aaKnown RBP eCLIP7.39□□□□□ -1.23
VCP-205ENST00000479300 QARSP47897 775 aaKnown RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 STARD6P59095 220 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 GPC5P78333 572 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 NTHL1P78549 312 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 DSC1Q08554 894 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 NCBP1Q09161 790 aaKnown RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 DSG2Q14126 1118 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 PLA2G4FQ68DD2 849 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 NCAPH2Q6IBW4 605 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 PPP4R3AQ6IN85 833 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 DCLRE1AQ6PJP8 1040 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 POTEHQ6S545 545 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 PARM1Q6UWI2 310 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 PIK3AP1Q6ZUJ8 805 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 ANO5Q75V66 913 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 CATSPER4Q7RTX7 472 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 RHPN2Q8IUC4 686 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 COLGALT2Q8IYK4 626 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 TCP11Q8WWU5 503 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 SLC7A3Q8WY07 619 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 ANP32BQ92688 251 aaKnown RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 FGF14Q92915 247 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 NLRP4Q96MN2 994 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 AIFM3Q96NN9 605 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 HINFPQ9BQA5 517 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 TMEM175Q9BSA9 504 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 DDX23Q9BUQ8 820 aaKnown RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 RSAD1Q9HA92 442 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 PARD6AQ9NPB6 346 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 MRPL17Q9NRX2 175 aaKnown RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 CHST7Q9NS84 486 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 SUCLA2Q9P2R7 463 aaPredicted RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 WRAP73Q9P2S5 460 aaPredicted RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 TPCN1Q9ULQ1 816 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 FAN1Q9Y2M0 1017 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 PPME1Q9Y570 386 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
VCP-205ENST00000479300 MTCL1Q9Y4B5 1905 aaKnown RBP7.39□□□□□ -1.23
VCP-205ENST00000479300 CACNA1GO43497 2377 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 FRYQ5TBA9 3013 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 CARNS1A5YM72 827 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 TGM5O43548 720 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 GAS2O43903 313 aaKnown RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 LETM1O95202 739 aaPredicted RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 ALDH2P05091 517 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 URODP06132 367 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 P4HBP07237 508 aaKnown RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 ADH1AP07327 375 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 RPL17P18621 184 aaKnown RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 CD72P21854 359 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 RFC5P40937 340 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 GLUD2P49448 558 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 RAB27AP51159 221 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 NPEPPSP55786 919 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 DSG1Q02413 1049 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 PPP2R5CQ13362 524 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 FZD5Q13467 585 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 SNW1Q13573 536 aaKnown RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 EPHA7Q15375 998 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 CALCRLQ16602 461 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 VARS2Q5ST30 1063 aaKnown RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 CYP26C1Q6V0L0 522 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 GET4Q7L5D6 327 aaPredicted RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 ZNF410Q86VK4 478 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 PALB2Q86YC2 1186 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 NECAB1Q8N987 351 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 FAM184AQ8NB25 1140 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 ZBTB44Q8NCP5 570 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 GSTCDQ8NEC7 633 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 RABGGTAQ92696 567 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 NELL1Q92832 810 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 GTF3C6Q969F1 213 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 NXPE3Q969Y0 559 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 CEP170P1Q96L14 293 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 ZFP42Q96MM3 310 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 MBOAT7Q96N66 472 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 CCDC94Q9BW85 323 aaPredicted RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 EIF2AQ9BY44 585 aaKnown RBP7.38□□□□□ -1.23
VCP-205ENST00000479300 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 PRKD2Q9BZL6 878 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 CACNG4Q9UBN1 327 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 HES2Q9Y543 173 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 CEP295Q9C0D2 2601 aa7.38□□□□□ -1.23
VCP-205ENST00000479300 DCDC2BA2VCK2 349 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ARL5CA6NH57 179 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 M0R2N6 131 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms