RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 SSBP05455 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 URODP06132 367 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 MAPTP10636 758 aaKnown RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 MCF2P10911 925 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 PLCG1P19174 1290 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 GRM5P41594 1212 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 NASPP49321 788 aaPredicted RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 SMTNP53814 917 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 NCKAP1LP55160 1127 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 DSG1Q02413 1049 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 ITIH3Q06033 890 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 KARSQ15046 597 aaKnown RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 ZRSR1Q15695 479 aaKnown RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 ZNF568Q3ZCX4 644 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 XKR4Q5GH76 650 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 FUT10Q6P4F1 479 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 ZPBP2Q6X784 338 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 RAD54LQ92698 747 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 KHSRPQ92945 711 aaKnown RBP eCLIP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 REEP2Q9BRK0 252 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 PHF7Q9BWX1 381 aaPredicted RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 EMILIN2Q9BXX0 1053 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 CDT1Q9H211 546 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 RXFP1Q9HBX9 757 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 POLD4Q9HCU8 107 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 MRPL17Q9NRX2 175 aaKnown RBP8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 KLK14Q9P0G3 267 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 STK17AQ9UEE5 414 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 ADAM28Q9UKQ2 775 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 USP20Q9Y2K6 914 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 CLIC4Q9Y696 253 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 CITO14578 2027 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 TRIP11Q15643 1979 aa8.39□□□□□ -1.07
RN7SL549P-201ENST00000478997 DENND4AQ7Z401 1863 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 SF3B1O75533 1304 aaKnown RBP eCLIP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 SLC16A4O15374 487 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 TOM1L1O75674 476 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 PAPLNO95428 1278 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 PIGRP01833 764 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 THP07101 528 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 CNPP09543 421 aaKnown RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 ALADP13716 330 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 LIG1P18858 919 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 SSTR3P32745 418 aaPredicted RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 ABCD1P33897 745 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 GLUD2P49448 558 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 CLCN4P51793 760 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 CREMQ03060 361 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 STRN3Q13033 797 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 SLC39A14Q15043 492 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 KIAA0319Q5VV43 1072 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 LLGL2Q6P1M3 1020 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 FAM173BQ6P4H8 233 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 MPZL3Q6UWV2 235 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 ALKAL1Q6UXT8 129 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 HSCBQ8IWL3 235 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 CEP120Q8N960 986 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 AUTS2Q8WXX7 1259 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 LARP4BQ92615 738 aaKnown RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 UROC1Q96N76 676 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 NECTIN4Q96NY8 510 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 PPP1R10Q96QC0 940 aaKnown RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 USP28Q96RU2 1077 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 PLIN2Q99541 437 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 CCDC94Q9BW85 323 aaPredicted RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 TARS2Q9BW92 718 aaKnown RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 RHOBTB2Q9BYZ6 727 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 TOPORSQ9NS56 1045 aaPredicted RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 FNIP2Q9P278 1114 aa8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
RN7SL549P-201ENST00000478997 SFI1A8K8P3 1242 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 F8W810 466 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 DCXO43602 365 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 GPR37L1O60883 481 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 KIF4AO95239 1232 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 ADH1AP07327 375 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 KCNE1P15382 129 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 EPCAMP16422 314 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 MARCKSP29966 332 aaPredicted RBP8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 DDIT3P35638 169 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 TXLNAP40222 546 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 MTHFRP42898 656 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 YARSP54577 528 aaKnown RBP8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 MCL1Q07820 350 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 RAD51AP2Q09MP3 1159 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 ELAVL2Q12926 359 aaKnown RBP8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 MCM6Q14566 821 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 NOLC1Q14978 699 aaKnown RBP eCLIP8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 USP41Q3LFD5 358 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 HERC4Q5GLZ8 1057 aaPredicted RBP8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 KIAA1841Q6NSI8 718 aa8.37□□□□□ -1.07
RN7SL549P-201ENST00000478997 CES5AQ6NT32 575 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms