RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 BLOC1S4Q9NUP1 217 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 ZNHIT6Q9NWK9 470 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 IL20Q9NYY1 176 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 PDP2Q9P2J9 529 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 WDR35Q9P2L0 1181 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 MCM8Q9UJA3 840 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 ZHX1Q9UKY1 873 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CNOT6Q9ULM6 557 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 PLA2G2DQ9UNK4 145 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TMEM98Q9Y2Y6 226 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 PCDHGB3Q9Y5G1 929 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 MORC2Q9Y6X9 1032 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TCRBV16S1A1N1A0A5B0 115 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 TBKBP1A7MCY6 615 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 TMCO5BA8MYB1 307 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 NKRFO15226 690 aaKnown RBP eCLIP3.94□□□□□ -1.789e-9■■■■■ 43.1
FNDC3B-209ENST00000478016 SPTLC2O15270 562 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 NBNO60934 754 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 RFPL3O75679 317 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 AGR2O95994 175 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 HSPA5P11021 654 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 COL6A2P12110 1019 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 MYCLP1P12525 358 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ATF2P15336 505 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CD86P42081 329 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 LIMK1P53667 647 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 LINC00310P59036 64 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ST5P78524 1137 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CACNB2Q08289 660 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 SSPNQ14714 243 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ARHGEF6Q15052 776 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 SF3B3Q15393 1217 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CRY1Q16526 586 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ZNF385BQ569K4 471 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 HECTD3Q5T447 861 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 FAAH2Q6GMR7 532 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 GALNT17Q6IS24 598 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 C16orf59Q7L2K0 433 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 FGD2Q7Z6J4 655 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 B3GNT8Q7Z7M8 397 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM74Q86UV6 250 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM73Q86UV7 250 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ZC3H18Q86VM9 953 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 TMEM151BQ8IW70 566 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 FAM126BQ8IXS8 530 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 FAM184AQ8NB25 1140 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 BICD2Q8TD16 824 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 NUP133Q8WUM0 1156 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 USP6NLQ92738 828 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 RBM18Q96H35 190 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 SCLYQ96I15 445 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CLUHP3Q96NS8 147 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 NEK1Q96PY6 1258 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CENPOQ9BU64 300 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 SEMA4AQ9H3S1 761 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CAAP1Q9H8G2 361 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 PCDH18Q9HCL0 1135 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ZCCHC17Q9NP64 241 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 NLRC4Q9NPP4 1024 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 PRDM11Q9NQV5 511 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 CATSPERZQ9NTU4 200 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ANKEF1Q9NU02 776 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 HECAQ9UBI9 543 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ASH2LQ9UBL3 628 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 DSEQ9UL01 958 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 MRPL11Q9Y3B7 192 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 KCTD3Q9Y597 815 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 MAGED1Q9Y5V3 778 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 NUP160Q12769 1436 aa3.94□□□□□ -1.78
FNDC3B-209ENST00000478016 ABHD14A-ACY1A0A1B0GW23 586 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CCDC66A2RUB6 948 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 DBX1A6NMT0 343 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 B4E1Z4 1266 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 MASP2O00187 686 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 PRPF3O43395 683 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 KINO60870 393 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ABLIM3O94929 683 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 NPTXRO95502 500 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CYP2C8P10632 490 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 PYGMP11217 842 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 HSD3B1P14060 373 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 PDE6AP16499 860 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 YBX3P16989 372 aaKnown RBP eCLIP3.93□□□□□ -1.781e-6■■□□□ 12
FNDC3B-209ENST00000478016 DESP17661 470 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 PI3P19957 117 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 HSPA4P34932 840 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 MC3RP41968 323 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 DNM2P50570 870 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 RCAN1P53805 252 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 MECOMQ03112 1051 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TRAF1Q13077 416 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CHAF1AQ13111 956 aaPredicted RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 PABPC4Q13310 644 aaKnown RBP eCLIP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TUSC3Q13454 348 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 PDIA5Q14554 519 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 RASA2Q15283 850 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 GPR19Q15760 415 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CCDC178Q5BJE1 867 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 C10orf76Q5T2E6 689 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CIAPIN1Q6FI81 312 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms