RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 DZANK1Q9NVP4 752 aa15.17■□□□□ 0.02
HDAC7-222ENST00000477937 LARSQ9P2J5 1176 aaKnown RBP15.17■□□□□ 0.02
HDAC7-222ENST00000477937 ADAM28Q9UKQ2 775 aa15.17■□□□□ 0.02
HDAC7-222ENST00000477937 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 MYH15Q9Y2K3 1946 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 LOC730098B7Z3J9 87 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 PTGESO14684 152 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 SLC16A4O15374 487 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 DCXO43602 365 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 GPR37L1O60883 481 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 TADA2AO75478 443 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 CNPP09543 421 aaKnown RBP15.16■□□□□ 0.02
HDAC7-222ENST00000477937 PLS3P13797 630 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 EPCAMP16422 314 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 GLUD2P49448 558 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 GRIN1Q05586 938 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-222ENST00000477937 TMEM31Q5JXX7 168 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 RNF168Q8IYW5 571 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-222ENST00000477937 RPGRIP1Q96KN7 1286 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 TCHPQ9BT92 498 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
HDAC7-222ENST00000477937 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 F8W810 466 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 H0YCG3 227 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 EFEMP2O95967 443 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
HDAC7-222ENST00000477937 STRN3Q13033 797 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 RESTQ13127 1097 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 DHX8Q14562 1220 aaKnown RBP15.15■□□□□ 0.02
HDAC7-222ENST00000477937 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 ARSHQ5FYA8 562 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 KIAA0319Q5VV43 1072 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 TAS1R3Q7RTX0 852 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 RNF135Q8IUD6 432 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 RIPOR3Q96MK2 946 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 NECTIN4Q96NY8 510 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 LRFN3Q9BTN0 628 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 CCDC94Q9BW85 323 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-222ENST00000477937 TARS2Q9BW92 718 aaKnown RBP15.15■□□□□ 0.02
HDAC7-222ENST00000477937 CCSER1Q9C0I3 900 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-222ENST00000477937 CHST7Q9NS84 486 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 ODF2LQ9ULJ1 636 aa15.15■□□□□ 0.02
HDAC7-222ENST00000477937 MYO10Q9HD67 2058 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 NPHP3-ACAD11A0A0J9YXS1 232 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 CASTOR2A6NHX0 329 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 STX6O43752 255 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 ADH1AP07327 375 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 PLCG1P19174 1290 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 MARCKSP29966 332 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-222ENST00000477937 GRM5P41594 1212 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 MTHFRP42898 656 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 CLCN4P51793 760 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 DSG1Q02413 1049 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 KARSQ15046 597 aaKnown RBP15.14■□□□□ 0.01
HDAC7-222ENST00000477937 PTPAQ15257 358 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 RARS2Q5T160 578 aaKnown RBP15.14■□□□□ 0.01
HDAC7-222ENST00000477937 FAM173BQ6P4H8 233 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 MPZL3Q6UWV2 235 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 ZBTB33Q86T24 672 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 C12orf76Q8N812 135 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-222ENST00000477937 TMEM161BQ8NDZ6 487 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 SNX21Q969T3 373 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 PAAF1Q9BRP4 392 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 GPR62Q9BZJ7 368 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 CDT1Q9H211 546 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 CXCL16Q9H2A7 254 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-222ENST00000477937 CACNG4Q9UBN1 327 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 DPP7Q9UHL4 492 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 MTMR6Q9Y217 621 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 SRPRBQ9Y5M8 271 aaKnown RBP15.14■□□□□ 0.01
HDAC7-222ENST00000477937 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 C2orf16Q68DN1 1984 aa15.14■□□□□ 0.01
HDAC7-222ENST00000477937 SF3B1O75533 1304 aaKnown RBP eCLIP15.14■□□□□ 0.016e-6■■□□□ 13.4
HDAC7-222ENST00000477937 TEX28O15482 410 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 KRT18P05783 430 aaKnown RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 MCF2P10911 925 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 COL9A1P20849 921 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 PROZP22891 400 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 DDIT3P35638 169 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 OSTNP61366 133 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 MCM6Q14566 821 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 PDCD11Q14690 1871 aaKnown RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 NAB2Q15742 525 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 HERC4Q5GLZ8 1057 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 ATAT1Q5SQI0 421 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 ELMSAN1Q6PJG2 1045 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms