RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 RTN4RL1Q86UN2 441 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-224ENST00000475524 ECHDC2Q86YB7 292 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 EIF2AQ9BY44 585 aaKnown RBP16.51■□□□□ 0.23
MCF2L-224ENST00000475524 MTIF3Q9H2K0 278 aaKnown RBP16.51■□□□□ 0.23
MCF2L-224ENST00000475524 TMEM161AQ9NX61 479 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-224ENST00000475524 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 IPPQ9Y573 584 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 BECN2A8MW95 431 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 HOXA2O43364 376 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 IL18RAPO95256 599 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 FGBP02675 491 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 STAG3L1P0CL83 205 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 CYP2J2P51589 502 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 SPAG1Q07617 926 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 NCAPHQ15003 741 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 CRELD2Q6UXH1 353 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 FRMD5Q7Z6J6 570 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 ZBTB33Q86T24 672 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 CDR2LQ86X02 465 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 NPAS4Q8IUM7 802 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 BRSK2Q8IWQ3 736 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 SMG8Q8ND04 991 aaKnown RBP16.5■□□□□ 0.23
MCF2L-224ENST00000475524 ACAP3Q96P50 834 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 PCIF1Q9H4Z3 704 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 ASB7Q9H672 318 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 GIT1Q9Y2X7 761 aa16.5■□□□□ 0.23
MCF2L-224ENST00000475524 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-224ENST00000475524 ITGA4P13612 1032 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 ATF7P17544 494 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-224ENST00000475524 SYN1P17600 705 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 TPM4P67936 248 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 TCTN1Q2MV58 587 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 XKR4Q5GH76 650 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 TMEM240Q5SV17 173 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 CDKAL1Q5VV42 579 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 NT5DC4Q86YG4 428 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 DHX40Q8IX18 779 aaKnown RBP16.49■□□□□ 0.23
MCF2L-224ENST00000475524 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 CRIPAKQ8N1N5 446 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 AOPEPQ8N6M6 819 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 TMC2Q8TDI7 906 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 MFSD14AQ96MC6 490 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
MCF2L-224ENST00000475524 NXF3Q9H4D5 531 aaKnown RBP16.49■□□□□ 0.23
MCF2L-224ENST00000475524 RPF1Q9H9Y2 349 aaKnown RBP16.49■□□□□ 0.23
MCF2L-224ENST00000475524 CBX8Q9HC52 389 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 DERAQ9Y315 318 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 COL4A6Q14031 1691 aa16.49■□□□□ 0.23
MCF2L-224ENST00000475524 TTC26A0AVF1 554 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 AKAP3O75969 853 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 AMHP03971 560 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
MCF2L-224ENST00000475524 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
MCF2L-224ENST00000475524 PSMD6Q15008 389 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 CEP135Q66GS9 1140 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 C16orf59Q7L2K0 433 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 CEP120Q8N960 986 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 SAAL1Q96ER3 474 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 BORCS6Q96GS4 357 aa16.48■□□□□ 0.23
MCF2L-224ENST00000475524 RBAKQ9NYW8 714 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-224ENST00000475524 ARMCX3Q9UH62 379 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-224ENST00000475524 TDRD15B5MCY1 1934 aaKnown RBP16.47■□□□□ 0.23
MCF2L-224ENST00000475524 PTPRSQ13332 1948 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 RECQL4O94761 1208 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 KRT13P13646 458 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 ZNF18P17022 549 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 KCNJ6P48051 423 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 CASP4P49662 377 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 ACOT2P49753 483 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 AP3M2P53677 418 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 WDR5P61964 334 aaKnown RBP16.47■□□□□ 0.23
MCF2L-224ENST00000475524 CLDN10P78369 228 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 ENOX2Q16206 610 aaKnown RBP16.47■□□□□ 0.23
MCF2L-224ENST00000475524 RASIP1Q5U651 963 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 ZNF365Q70YC5 407 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 PHOSPHO2Q8TCD6 241 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 SNX27Q96L92 541 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 SLC9A7Q96T83 725 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.47■□□□□ 0.231e-9■■□□□ 11.6
MCF2L-224ENST00000475524 RSAD1Q9HA92 442 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 SNTG2Q9NY99 539 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 MAGEC2Q9UBF1 373 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-224ENST00000475524 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 PCDHB7Q9Y5E2 793 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
MCF2L-224ENST00000475524 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms