RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 BICD1Q96G01 975 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
TRAIP-205ENST00000475495 EIF2AQ9BY44 585 aaKnown RBP11.09□□□□□ -0.63
TRAIP-205ENST00000475495 BLZF1Q9H2G9 400 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 NKX2-4Q9H2Z4 354 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 PDZD7Q9H5P4 517 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 PYCARDQ9ULZ3 195 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 YBX2Q9Y2T7 364 aaKnown RBP11.09□□□□□ -0.63
TRAIP-205ENST00000475495 PAXBP1Q9Y5B6 917 aa11.09□□□□□ -0.63
TRAIP-205ENST00000475495 COL4A6Q14031 1691 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TBKBP1A7MCY6 615 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TOM1L1O75674 476 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 GCNT3O95395 438 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 NPTXRO95502 500 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 CA3P07451 260 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 ITGA4P13612 1032 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 ATF7P17544 494 aaPredicted RBP11.08□□□□□ -0.64
TRAIP-205ENST00000475495 CUL4BQ13620 913 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 BTG3Q14201 252 aaPredicted RBP11.08□□□□□ -0.64
TRAIP-205ENST00000475495 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 PPP2R2DQ66LE6 453 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 GLB1LQ6UWU2 654 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 GRAMD1CQ8IYS0 662 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 FIBCD1Q8N539 461 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 CCDC47Q96A33 483 aaKnown RBP11.08□□□□□ -0.64
TRAIP-205ENST00000475495 ACCSQ96QU6 501 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TCHPQ9BT92 498 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TARS2Q9BW92 718 aaKnown RBP11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TMEM117Q9H0C3 514 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 RC3H2Q9HBD1 1191 aaKnown RBP11.08□□□□□ -0.64
TRAIP-205ENST00000475495 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 EXOC7Q9UPT5 735 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 IPPQ9Y573 584 aa11.08□□□□□ -0.64
TRAIP-205ENST00000475495 MYO7AQ13402 2215 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 HNRNPDLO14979 420 aaKnown RBP11.07□□□□□ -0.64
TRAIP-205ENST00000475495 CLDN3O15551 220 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 PPP1R37O75864 691 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 PIGRP01833 764 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 EDN1P05305 212 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 MCF2P10911 925 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 FGFR1P11362 822 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 PROZP22891 400 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 CASP1P29466 404 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 LIG4P49917 911 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 EHHADHQ08426 723 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 PSMD2Q13200 908 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 ZNF568Q3ZCX4 644 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 ZC2HC1CQ53FD0 456 aaPredicted RBP11.07□□□□□ -0.64
TRAIP-205ENST00000475495 FAM26FQ5R3K3 315 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 MPZL3Q6UWV2 235 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 CDR2LQ86X02 465 aaPredicted RBP11.07□□□□□ -0.64
TRAIP-205ENST00000475495 MAP4K3Q8IVH8 894 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 SMG8Q8ND04 991 aaKnown RBP11.07□□□□□ -0.64
TRAIP-205ENST00000475495 LPPQ93052 612 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 SAMD11Q96NU1 681 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 CASD1Q96PB1 797 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
TRAIP-205ENST00000475495 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 MRPL9Q9BYD2 267 aaKnown RBP11.07□□□□□ -0.64
TRAIP-205ENST00000475495 ZNF576Q9H609 170 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 PTPRHQ9HD43 1115 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 KANSL3Q9P2N6 904 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 USP20Q9Y2K6 914 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 GIT1Q9Y2X7 761 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 CHD9Q3L8U1 2897 aa11.07□□□□□ -0.64
TRAIP-205ENST00000475495 ZMYM2Q9UBW7 1377 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 LCHNA4D1U4 455 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 CARNS1A5YM72 827 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 KLRC4O43908 158 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 RPN1P04843 607 aaKnown RBP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 MYBP10242 640 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 MATR3P43243 847 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 ERVK-21P61565 698 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 FANCCQ00597 558 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 TAP1Q03518 808 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 DPYDQ12882 1025 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 NCAPHQ15003 741 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 SYCP1Q15431 976 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 KYAT1Q16773 422 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 PAN2Q504Q3 1202 aaKnown RBP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 NOMO2Q5JPE7 1267 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 CLLU1OSQ5K130 101 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 EEF1DP3Q658K8 133 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 SLFN12LQ6IEE8 588 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 AGMOQ6ZNB7 445 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 SYCP3Q8IZU3 236 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 URGCPQ8TCY9 931 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 HELQQ8TDG4 1101 aa11.06□□□□□ -0.64
TRAIP-205ENST00000475495 CACTINQ8WUQ7 758 aaKnown RBP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 CLP1Q92989 425 aaKnown RBP11.06□□□□□ -0.64
TRAIP-205ENST00000475495 GTPBP4Q9BZE4 634 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms