RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 IL17AQ16552 155 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 USP41Q3LFD5 358 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 CDCA2Q69YH5 1023 aaPredicted RBP16.65■□□□□ 0.26
VARS-223ENST00000474643 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 SLC22A17Q8WUG5 538 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 PIDD1Q9HB75 910 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 MARCH5Q9NX47 278 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 ADAM28Q9UKQ2 775 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 DNM3Q9UQ16 869 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 CLIC4Q9Y696 253 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
VARS-223ENST00000474643 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
VARS-223ENST00000474643 MYBP10242 640 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 DSC1Q08554 894 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
VARS-223ENST00000474643 FAM187BQ17R55 369 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 DCAF4L1Q3SXM0 396 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 FOXD4L6Q3SYB3 417 aaPredicted RBP16.64■□□□□ 0.25
VARS-223ENST00000474643 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 FUT10Q6P4F1 479 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 FOXD4L3Q6VB84 417 aaPredicted RBP16.64■□□□□ 0.25
VARS-223ENST00000474643 OTOP3Q7RTS5 596 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 GLYCTKQ8IVS8 523 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 UBALD2Q8IYN6 164 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 FBXL6Q8N531 539 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
VARS-223ENST00000474643 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 PDZD7Q9H5P4 517 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.64■□□□□ 0.25
VARS-223ENST00000474643 SNTG2Q9NY99 539 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
VARS-223ENST00000474643 GDAQ9Y2T3 454 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.25
VARS-223ENST00000474643 TRIOO75962 3097 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 CASTOR2A6NHX0 329 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 ACKR2O00590 384 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 INPPL1O15357 1258 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 TEX28O15482 410 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 RECQL4O94761 1208 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 THP07101 528 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 MARCKSP29966 332 aaPredicted RBP16.63■□□□□ 0.25
VARS-223ENST00000474643 UBA7P41226 1012 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 DMP1Q13316 513 aaPredicted RBP16.63■□□□□ 0.25
VARS-223ENST00000474643 BMP8AQ7Z5Y6 402 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 CEP57Q86XR8 500 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 PALB2Q86YC2 1186 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 HASPINQ8TF76 798 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 RIN2Q8WYP3 895 aaPredicted RBP16.63■□□□□ 0.25
VARS-223ENST00000474643 RABGGTAQ92696 567 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 STAMQ92783 540 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 AK8Q96MA6 479 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 PLIN2Q99541 437 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 PRRX2Q99811 253 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 FZD8Q9H461 694 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 MIOSQ9NXC5 875 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 USTQ9Y2C2 406 aa16.63■□□□□ 0.25
VARS-223ENST00000474643 TDRD15B5MCY1 1934 aaKnown RBP16.62■□□□□ 0.25
VARS-223ENST00000474643 K7ERI5 159 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 F13A1P00488 732 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 GBP2P32456 591 aaPredicted RBP16.62■□□□□ 0.25
VARS-223ENST00000474643 LONP1P36776 959 aaKnown RBP16.62■□□□□ 0.25
VARS-223ENST00000474643 YARSP54577 528 aaKnown RBP16.62■□□□□ 0.25
VARS-223ENST00000474643 TUSC3Q13454 348 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 STK38Q15208 465 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 ECM1Q16610 540 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 ATF7IP2Q5U623 682 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 TAS1R1Q7RTX1 841 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 GPR149Q86SP6 731 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 BSNDQ8WZ55 320 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 B3GALT6Q96L58 329 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 NT5C3AQ9H0P0 336 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 LIMD1Q9UGP4 676 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
VARS-223ENST00000474643 CCDC195A0A1B0GUA6 201 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 F8W810 466 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 ASGR2P07307 311 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 PTPN5P54829 565 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 PEX3P56589 373 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 DSG1Q02413 1049 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 ZNF568Q3ZCX4 644 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 ZDHHC14Q8IZN3 488 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
VARS-223ENST00000474643 TCHPQ9BT92 498 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 POLD4Q9HCU8 107 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 KMT5AQ9NQR1 393 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 MUC6Q6W4X9 2439 aa16.61■□□□□ 0.25
VARS-223ENST00000474643 E9PMD0 336 aa16.6■□□□□ 0.25
VARS-223ENST00000474643 SPATA31D3P0C874 917 aa16.6■□□□□ 0.25
VARS-223ENST00000474643 RFX1P22670 979 aa16.6■□□□□ 0.25
VARS-223ENST00000474643 TXLNAP40222 546 aa16.6■□□□□ 0.25
VARS-223ENST00000474643 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
VARS-223ENST00000474643 LIN9Q5TKA1 542 aa16.6■□□□□ 0.25
VARS-223ENST00000474643 FAM171A1Q5VUB5 890 aa16.6■□□□□ 0.25
VARS-223ENST00000474643 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms