RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 Q4G0T1 1027 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 RNF20Q5VTR2 975 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 PLA2G4FQ68DD2 849 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 LILRA6Q6PI73 481 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 SPATA31D4Q6ZUB0 917 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 GPR65Q8IYL9 337 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 SMG8Q8ND04 991 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 ST13P5Q8NFI4 369 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 ETNPPLQ8TBG4 499 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 TBCKQ8TEA7 893 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 FGF14Q92915 247 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 PHKBQ93100 1093 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 B3GALT6Q96L58 329 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 MBOAT7Q96N66 472 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 JPH2Q9BR39 696 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 RTKNQ9BST9 563 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 RPP25Q9BUL9 199 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 DDX23Q9BUQ8 820 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 PRKD2Q9BZL6 878 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 NT5C3AQ9H0P0 336 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 NAP1L2Q9ULW6 460 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 CNOT1A5YKK6 2376 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 BAHCC1Q9P281 2608 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 F5P12259 2224 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 FAM208BQ5VWN6 2430 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CYP3A7-CYP3A51PA0A087WV96 503 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 KANSL1LA0AUZ9 987 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 GAS2O43903 313 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 ZMYND10O75800 440 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 TDP2O95551 362 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 ITGA4P13612 1032 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CYP3A7P24462 503 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 SCNN1GP51170 649 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 NPEPPSP55786 919 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PSMC5P62195 406 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 GPC5P78333 572 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 LMNB2Q03252 620 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 KCNC4Q03721 635 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PRKCQQ04759 706 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 LAMTOR4Q0VGL1 99 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 MLF2Q15773 248 aaPredicted RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 NTRK3Q16288 839 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 FUT10Q6P4F1 479 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PARM1Q6UWI2 310 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PALB2Q86YC2 1186 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 ZBTB44Q8NCP5 570 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CNNM3Q8NE01 707 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CCDC148Q8NFR7 591 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PRPF31Q8WWY3 499 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PSPC1Q8WXF1 523 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 SLC7A3Q8WY07 619 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 DDX1Q92499 740 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 NELL1Q92832 810 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 TMEM143Q96AN5 459 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CCDC51Q96ER9 411 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 SHDQ96IW2 340 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 ZFP42Q96MM3 310 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 GAD1Q99259 594 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 EIF2AQ9BY44 585 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 GPR62Q9BZJ7 368 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 DHX33Q9H6R0 707 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PIDD1Q9HB75 910 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 UBN1Q9NPG3 1134 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 SPATA6Q9NWH7 488 aaPredicted RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 VPS54Q9P1Q0 977 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 FNIP2Q9P278 1114 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 WRAP73Q9P2S5 460 aaPredicted RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 FBXW11Q9UKB1 542 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 FBXO4Q9UKT5 387 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 VAV3Q9UKW4 847 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CDV3Q9UKY7 258 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 CDH7Q9ULB5 785 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 SMG5Q9UPR3 1016 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 HES2Q9Y543 173 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 IPPQ9Y573 584 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PCDHGA2Q9Y5H1 932 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 ZFP37Q9Y6Q3 630 aaPredicted RBP5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 DOCK6Q96HP0 2047 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 MIA3Q5JRA6 1907 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 PATJQ8NI35 1801 aa5.73□□□□□ -1.49
SNRNP40-204ENST00000474025 ITPR1Q14643 2758 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 MYH15Q9Y2K3 1946 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 ZMYM2Q9UBW7 1377 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 M0R2N6 131 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 EML1O00423 815 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 LAMTOR5O43504 91 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 SLC37A4O43826 429 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 FOXD2O60548 495 aaPredicted RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 TSPAN1O60635 241 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 LILRB5O75023 590 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 NR1I2O75469 434 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 ERLIN2O94905 339 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 HMGB1P09429 215 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 SRGAP2CP0DJJ0 459 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 CPA1P15085 419 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 IFNAR1P17181 557 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 RPL17P18621 184 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 TGM1P22735 817 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms