RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ALOX15P16050 662 aaPredicted RBP7.41□□□□□ -1.22
CLK1-209ENST00000472679 DSC2Q02487 901 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 CSRP2Q16527 193 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 ERICH6BQ5W0A0 696 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 PDZD4Q76G19 769 aaPredicted RBP7.41□□□□□ -1.22
CLK1-209ENST00000472679 SGMS1Q86VZ5 419 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 CHPFQ8IZ52 775 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 PRR18Q8N4B5 295 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 TCEAL9Q9UHQ7 104 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 CNOT11Q9UKZ1 510 aaKnown RBP7.41□□□□□ -1.22
CLK1-209ENST00000472679 PNMA8BQ9ULN7 279 aaPredicted RBP7.41□□□□□ -1.22
CLK1-209ENST00000472679 ACTL7AQ9Y615 435 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 CAPN14A8MX76 684 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 TSPAN6O43657 245 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 ATP8B2P98198 1209 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 FAM47AQ5JRC9 791 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 AFMIDQ63HM1 303 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 MFSD5Q6N075 450 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 USP45Q70EL2 814 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 MB21D1Q8N884 522 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 CHST13Q8NET6 341 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 LRGUKQ96M69 825 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 DMRTA2Q96SC8 542 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 CPPED1Q9BRF8 314 aaPredicted RBP7.4□□□□□ -1.22
CLK1-209ENST00000472679 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 CPEB1Q9BZB8 566 aaKnown RBP7.4□□□□□ -1.22
CLK1-209ENST00000472679 DEF6Q9H4E7 631 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 TDP1Q9NUW8 608 aa7.4□□□□□ -1.22
CLK1-209ENST00000472679 MYBBP1AQ9BQG0 1328 aaKnown RBP7.4□□□□□ -1.22
CLK1-209ENST00000472679 GPR32O75388 356 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 PARNO95453 639 aaKnown RBP7.39□□□□□ -1.23
CLK1-209ENST00000472679 VCAM1P19320 739 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 AKAP5P24588 427 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 ALDH1A3P47895 512 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 FLT3LGP49771 235 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 SP140Q13342 867 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 MTM1Q13496 603 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 ZNF267Q14586 743 aaPredicted RBP7.39□□□□□ -1.23
CLK1-209ENST00000472679 C1QL3Q5VWW1 255 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 APBB1IPQ7Z5R6 666 aaPredicted RBP7.39□□□□□ -1.23
CLK1-209ENST00000472679 TTC9BQ8N6N2 239 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 MDGA1Q8NFP4 955 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 ST8SIA2Q92186 375 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 CYFIP2Q96F07 1278 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 ADOQ96SZ5 270 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 MYOCQ99972 504 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 KLC2Q9H0B6 622 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 SLC12A5Q9H2X9 1139 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 ANLNQ9NQW6 1124 aa7.39□□□□□ -1.23
CLK1-209ENST00000472679 CXorf49A8MYA2 514 aaPredicted RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 HSP90B1P14625 803 aaKnown RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 IL2RBP14784 551 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 GNAT2P19087 354 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 DDCP20711 480 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 LPOP22079 712 aaPredicted RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 CDC42EP1Q00587 391 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 EFEMP1Q12805 493 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 R3HDM1Q15032 1099 aaKnown RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 IFIT1BQ5T764 474 aaKnown RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 FAM102BQ5T8I3 360 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 Q6ZRM9 215 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 DOK3Q7L591 496 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 EPM2AIP1Q7L775 607 aaPredicted RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 GPRIN1Q7Z2K8 1008 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 HPS3Q969F9 1004 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 MIEF2Q96C03 454 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 TMX3Q96JJ7 454 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 CLPTM1LQ96KA5 538 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 TMEM140Q9NV12 185 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 SLC23A1Q9UHI7 598 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 RUVBL1Q9Y265 456 aaKnown RBP7.38□□□□□ -1.23
CLK1-209ENST00000472679 TCAF1Q9Y4C2 921 aa7.38□□□□□ -1.23
CLK1-209ENST00000472679 PNPLA7Q6ZV29 1317 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 LRRC14BA6NHZ5 514 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 AP1G1O43747 822 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 MFAP3LO75121 409 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 RAP2AP10114 183 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 HK1P19367 917 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 HIBADHP31937 336 aaKnown RBP7.37□□□□□ -1.23
CLK1-209ENST00000472679 CYP2C19P33261 490 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 SELENOPP49908 381 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 SCNN1GP51170 649 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 RABGGTBP53611 331 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 HHEXQ03014 270 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 HS1BP3Q53T59 392 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 RSPH3Q86UC2 560 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 ANKRD35Q8N283 1001 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 OR52N2Q8NGI0 321 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 IFI44Q8TCB0 444 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 NSUN6Q8TEA1 469 aaKnown RBP7.37□□□□□ -1.23
CLK1-209ENST00000472679 ATXN2LQ8WWM7 1075 aaKnown RBP7.37□□□□□ -1.23
CLK1-209ENST00000472679 CASKIN2Q8WXE0 1202 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 EDAQ92838 391 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 PGBD4Q96DM1 585 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms