RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 FCARP24071 287 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 CTHP32929 405 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 SOX9P48436 509 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 DSC3Q14574 896 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 WDR43Q15061 677 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPC25-203ENST00000472216 IGFBP7Q16270 282 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 RABEPKQ7Z6M1 372 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 LCORLQ8N3X6 602 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
SPC25-203ENST00000472216 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
SPC25-203ENST00000472216 PILRBQ9UKJ0 227 aa11.22□□□□□ -0.61
SPC25-203ENST00000472216 RRN3P2A6NIE6 340 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 APAF1O14727 1248 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 CCL16O15467 120 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 JUPP14923 745 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 ZSCAN20P17040 1043 aaPredicted RBP11.21□□□□□ -0.61
SPC25-203ENST00000472216 HNF1BP35680 557 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 SLC11A1P49279 550 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 GLUD2P49448 558 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 GRM4Q14833 912 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 PPM1LQ5SGD2 360 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 LIN9Q5TKA1 542 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 VITQ6UXI7 678 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 ERICH1Q86X53 443 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 ZBTB10Q96DT7 871 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
SPC25-203ENST00000472216 DKK3Q9UBP4 350 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
SPC25-203ENST00000472216 CABIN1Q9Y6J0 2220 aa11.21□□□□□ -0.62
SPC25-203ENST00000472216 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.62
SPC25-203ENST00000472216 COL4A2P08572 1712 aa11.21□□□□□ -0.62
SPC25-203ENST00000472216 ATXN2Q99700 1313 aaKnown RBP11.2□□□□□ -0.62
SPC25-203ENST00000472216 ADAMTS9Q9P2N4 1935 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 ARNTLO00327 626 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 PRKAB2O43741 272 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 SFTPCP11686 197 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 HOXA9P31269 272 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 PTGER3P43115 390 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 PEAR1Q5VY43 1037 aaPredicted RBP11.2□□□□□ -0.62
SPC25-203ENST00000472216 LYSMD4Q5XG99 296 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
SPC25-203ENST00000472216 POLR3BQ9NW08 1133 aaPredicted RBP11.2□□□□□ -0.62
SPC25-203ENST00000472216 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
SPC25-203ENST00000472216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 B4E1Z4 1266 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 BRINP1O60477 761 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 MYCLP12524 364 aaPredicted RBP11.19□□□□□ -0.62
SPC25-203ENST00000472216 SLC16A2P36021 539 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 NEDD9Q14511 834 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 NBR1Q14596 966 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 TBC1D25Q3MII6 688 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 FAM78AQ5JUQ0 283 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 SPDYCQ5MJ68 293 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 CLSTN3Q9BQT9 956 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 HERC2P3Q9BVR0 1158 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 GBP3Q9H0R5 595 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 ERAP1Q9NZ08 941 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 COL20A1Q9P218 1284 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
SPC25-203ENST00000472216 MED13Q9UHV7 2174 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 FBN1P35555 2871 aaKnown RBP11.18□□□□□ -0.62
SPC25-203ENST00000472216 HIVEP3Q5T1R4 2406 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
SPC25-203ENST00000472216 ALDH2P05091 517 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 UBTFL1P0CB47 393 aaPredicted RBP11.18□□□□□ -0.62
SPC25-203ENST00000472216 ITGB6P18564 788 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 MARK3P27448 753 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 ADRA1BP35368 520 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 SLC9C2Q5TAH2 1124 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 CYFIP1Q7L576 1253 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 GLYCTKQ8IVS8 523 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 PNMA5Q96PV4 448 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 DBNDD2Q9BQY9 259 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 ARMT1Q9H993 441 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 PXMP2Q9NR77 195 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPC25-203ENST00000472216 TBC1D13Q9NVG8 400 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 HCFC1R1Q9NWW0 138 aa11.18□□□□□ -0.62
SPC25-203ENST00000472216 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
SPC25-203ENST00000472216 WDR19Q8NEZ3 1342 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 A0A0U1RQF3 1178 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 AGFG2O95081 481 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
SPC25-203ENST00000472216 SKIP12755 728 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 ITPKAP23677 461 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 INHBCP55103 352 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 PCBP4P57723 403 aaKnown RBP11.17□□□□□ -0.62
SPC25-203ENST00000472216 NCAPHQ15003 741 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 CCDC157Q569K6 752 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 C1QL3Q5VWW1 255 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 BTNL9Q6UXG8 535 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 SYT13Q7L8C5 426 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 TAS1R1Q7RTX1 841 aa11.17□□□□□ -0.62
SPC25-203ENST00000472216 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms