RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MAP4K1Q92918 833 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 JPH2Q9BR39 696 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CORO1BQ9BR76 489 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 ARRDC1-AS1Q9H2J1 176 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 NXF3Q9H4D5 531 aaKnown RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SMOC1Q9H4F8 434 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 IFT122Q9HBG6 1241 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 ANO2Q9NQ90 1003 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CHST7Q9NS84 486 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 FNIP2Q9P278 1114 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 BRPF3Q9ULD4 1205 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 PIAS3Q9Y6X2 628 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SF3B1O75533 1304 aaKnown RBP eCLIP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CHD6Q8TD26 2715 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 MAN2B1O00754 1011 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 ADAM12O43184 909 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 HRO43593 1189 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 LRG1P02750 347 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 HNRNPA1P09651 372 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CEBPBP17676 345 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 LIG1P18858 919 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CCNE1P24864 410 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CDC27P30260 824 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 GDI1P31150 447 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 HOXA11P31270 313 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 ELF1P32519 619 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 OR1D2P34982 312 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 RBM25P49756 843 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 PFKFB3Q16875 520 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CREB3L3Q68CJ9 461 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 LILRA6Q6PI73 481 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 FAM160A2Q8N612 972 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 ZNF579Q8NAF0 562 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 BICD2Q8TD16 824 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CLDN23Q96B33 292 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CCDC43Q96MW1 224 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 RIT2Q99578 217 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 CLSTN3Q9BQT9 956 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 PAAF1Q9BRP4 392 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 TRMT61BQ9BVS5 477 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 NIFKQ9BYG3 293 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 RHOBTB2Q9BYZ6 727 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 SLITRK6Q9H5Y7 841 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 RBM12Q9NTZ6 932 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 DNMT3BQ9UBC3 853 aaKnown RBP7.66□□□□□ -1.18
HDAC1-204ENST00000471488 FBXW11Q9UKB1 542 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 USP24Q9UPU5 2620 aa7.66□□□□□ -1.18
HDAC1-204ENST00000471488 IGKV6-21A0A0C4DH24 114 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 PRRG1O14668 218 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 TSPAN1O60635 241 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 LRP3O75074 770 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 ECI2O75521 394 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 KIF4AO95239 1232 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 TDP2O95551 362 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 PROS1P07225 676 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 RHOP08100 348 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 CCDC192P0DO97 292 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 PMLP29590 882 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 PXNP49023 591 aaPredicted RBP7.65□□□□□ -1.18
HDAC1-204ENST00000471488 KPNA1P52294 538 aaPredicted RBP7.65□□□□□ -1.18
HDAC1-204ENST00000471488 NLRP5P59047 1200 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 PSMC5P62195 406 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 DSC1Q08554 894 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 SLC5A9Q2M3M2 681 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 XKR9Q5GH70 373 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 UNQ6494/PRO21346Q6UXR6 183 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 ANO5Q75V66 913 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 YAF2Q8IY57 180 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 RNF168Q8IYW5 571 aaPredicted RBP7.65□□□□□ -1.18
HDAC1-204ENST00000471488 CSGALNACT1Q8TDX6 532 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 TBCKQ8TEA7 893 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 NELL1Q92832 810 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 SLC5A5Q92911 643 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 LENG9Q96B70 501 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 MTA3Q9BTC8 594 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 SLC26A6Q9BXS9 759 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 CSRNP2Q9H175 543 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 CHRDQ9H2X0 955 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 ZFP14Q9HCL3 533 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 RXFP3Q9NSD7 469 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 VPS54Q9P1Q0 977 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 GIT1Q9Y2X7 761 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 CDY1Q9Y6F8 540 aa7.65□□□□□ -1.18
HDAC1-204ENST00000471488 RALGAPA1Q6GYQ0 2036 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 DOCK6Q96HP0 2047 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 TDRD15B5MCY1 1934 aaKnown RBP7.64□□□□□ -1.19
HDAC1-204ENST00000471488 SLC38A8A6NNN8 435 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 ZNF263O14978 683 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 B4GALT5O43286 388 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 KCNK5O95279 499 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 MYL4P12829 197 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 GJA1P17302 382 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 PTPN2P17706 415 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 HOXC13P31276 330 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 CIITAP33076 1130 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 SOX9P48436 509 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms