RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 POLR3GLQ9BT43 218 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 DDX21Q9NR30 783 aaKnown RBP eCLIP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 MAN1C1Q9NR34 630 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 EVLQ9UI08 416 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 SCOCQ9UIL1 159 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 USP18Q9UMW8 372 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 ALS2Q96Q42 1657 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 ARID1BQ8NFD5 2236 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-204ENST00000471245 IL18BPO95998 194 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 CHGBP05060 677 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 PDCP20941 246 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 ITGA1P56199 1179 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
CKS1B-204ENST00000471245 GALEQ14376 348 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 DGKDQ16760 1214 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 GJC2Q5T442 439 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-204ENST00000471245 SYCP2LQ5T4T6 812 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 BTNL9Q6UXG8 535 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 KRT28Q7Z3Y7 464 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 GLB1L2Q8IW92 636 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 FAM43AQ8N2R8 423 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 PJA1Q8NG27 643 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 C1GALT1C1Q96EU7 318 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 MVB12AQ96EY5 273 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 DIRC2Q96SL1 478 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 KCND1Q9NSA2 647 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 ZFP69BQ9UJL9 534 aa7.09□□□□□ -1.27
CKS1B-204ENST00000471245 TECPR2O15040 1411 aa7.09□□□□□ -1.28
CKS1B-204ENST00000471245 ANO9A1A5B4 782 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 PFKLP17858 780 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 XPAP23025 273 aaPredicted RBP7.08□□□□□ -1.28
CKS1B-204ENST00000471245 MC3RP41968 323 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 NRG3P56975 720 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 MUM1L1Q5H9M0 696 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 GAREM2Q75VX8 874 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 ZNF605Q86T29 641 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 LDHDQ86WU2 507 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 PPM1NQ8N819 430 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 SMARCC2Q8TAQ2 1214 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 MORC4Q8TE76 937 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 GREM2Q9H772 168 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 FAM204AQ9H8W3 233 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 CHST12Q9NRB3 414 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.08□□□□□ -1.28
CKS1B-204ENST00000471245 FBXO10Q9UK96 956 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 SYNPO2Q9UMS6 1093 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 PCDHA5Q9Y5H7 936 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 PLEKHH1Q9ULM0 1364 aa7.08□□□□□ -1.28
CKS1B-204ENST00000471245 NRXN1Q9ULB1 1477 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MYOCOSA0A1B0GUC4 107 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 H3BML4 177 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 HTRA2O43464 458 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 EIF3JO75822 258 aaKnown RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 HRGP04196 525 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MED14OSP0DP75 135 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 ATF2P15336 505 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 GLDCP23378 1020 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MCAMP43121 646 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 CCT2P78371 535 aaKnown RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 CD83Q01151 205 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MEF2AQ02078 507 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 OS9Q13438 667 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 ADAM9Q13443 819 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 FZD5Q13467 585 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 BRD3Q15059 726 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 PGS1Q32NB8 556 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 KLHDC10Q6PID8 442 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 GRAMD1CQ8IYS0 662 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MARCH10Q8NA82 808 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 ZBTB34Q8NCN2 500 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 PPP1R14CQ8TAE6 165 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 ACO2Q99798 780 aaKnown RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 TACO1Q9BSH4 297 aaKnown RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 KRTAP4-2Q9BYR5 136 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MCOLN1Q9GZU1 580 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 MYH16Q9H6N6 1097 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 POLR3BQ9NW08 1133 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-204ENST00000471245 SIRT5Q9NXA8 310 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 DNM3Q9UQ16 869 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 IPPQ9Y573 584 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 COMMD10Q9Y6G5 202 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 UTRNP46939 3433 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 PARD3Q8TEW0 1356 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 NINLQ9Y2I6 1382 aa7.07□□□□□ -1.28
CKS1B-204ENST00000471245 SBF2Q86WG5 1849 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 RGPD3A6NKT7 1758 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 RGPD4Q7Z3J3 1758 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 FAM227AF5H4B4 570 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 CYP7B1O75881 506 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 ZBED1O96006 694 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 NBPF7P0C2Y1 421 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 EDNRBP24530 442 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 IGFBP6P24592 240 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 IL12RB1P42701 662 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 GLRBP48167 497 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms