RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 IGKV6D-21A0A0A0MT36 114 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 PIK3CDO00329 1044 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 CAPN9O14815 690 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 NR1I2O75469 434 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 EFEMP2O95967 443 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 POMCP01189 267 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 PSMC3P17980 439 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 GPC3P51654 580 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 KCNC4Q03721 635 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 CSGALNACT1Q8TDX6 532 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 NLRP7Q8WX94 980 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
VPS26A-204ENST00000467852 PLXNB3Q9ULL4 1909 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 NEDD4P46934 1319 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 MEIS2O14770 477 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 ZNF263O14978 683 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
VPS26A-204ENST00000467852 POU2F2P09086 479 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
VPS26A-204ENST00000467852 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 COLEC11Q9BWP8 271 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-204ENST00000467852 C8orf33Q9H7E9 229 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-204ENST00000467852 RSAD1Q9HA92 442 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 SLC8A2Q9UPR5 921 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
VPS26A-204ENST00000467852 THADAQ6YHU6 1953 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 ABCA7Q8IZY2 2146 aa13.19□□□□□ -0.3
VPS26A-204ENST00000467852 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 CNTNAP2Q9UHC6 1331 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 TEP1Q99973 2627 aaKnown RBP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 ATG2BQ96BY7 2078 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 EXTL3O43909 919 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 KIF5BP33176 963 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 IRX4P78413 519 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 LMAN2Q12907 356 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 IFIT1BQ5T764 474 aaKnown RBP13.18□□□□□ -0.3
VPS26A-204ENST00000467852 ABHD15Q6UXT9 468 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 AGMOQ6ZNB7 445 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 COLGALT2Q8IYK4 626 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 LRRC71Q8N4P6 559 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 CRELD1Q96HD1 420 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 PCDHB2Q9Y5E7 798 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
VPS26A-204ENST00000467852 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 FCARP24071 287 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 PI4KAP42356 2102 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 AFF1P51825 1210 aaKnown RBP13.17□□□□□ -0.3
VPS26A-204ENST00000467852 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-204ENST00000467852 CCDC60Q8IWA6 550 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-204ENST00000467852 SLC7A14Q8TBB6 771 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 INO80BQ9C086 356 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-204ENST00000467852 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
VPS26A-204ENST00000467852 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
VPS26A-204ENST00000467852 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
VPS26A-204ENST00000467852 ATG13O75143 517 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 RHOP08100 348 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 ATP4AP20648 1035 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 GBP1P32455 592 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 FAM78AQ5JUQ0 283 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
VPS26A-204ENST00000467852 FUT10Q6P4F1 479 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 VITQ6UXI7 678 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 PIP4P1Q86T03 277 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 CAMKK1Q8N5S9 505 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 MXRA8Q9BRK3 442 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
VPS26A-204ENST00000467852 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 PATE3B3GLJ2 98 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 B4E1Z4 1266 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 ZNF862O60290 1169 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 CEBPBP17676 345 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 ABCG1P45844 678 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 HNRNPDQ14103 355 aaKnown RBP13.15□□□□□ -0.3
VPS26A-204ENST00000467852 SLC5A9Q2M3M2 681 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 PDXDC1Q6P996 788 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
VPS26A-204ENST00000467852 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms