RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TTLL3Q9Y4R7 772 aa6.38□□□□□ -1.39
LRCH3-212ENST00000466845 RNF123Q5XPI4 1314 aa6.38□□□□□ -1.39
LRCH3-212ENST00000466845 FMN1Q68DA7 1419 aa6.38□□□□□ -1.39
LRCH3-212ENST00000466845 ADGRL1O94910 1474 aa6.38□□□□□ -1.39
LRCH3-212ENST00000466845 CFAP74Q9C0B2 1584 aa6.38□□□□□ -1.39
LRCH3-212ENST00000466845 ADAMTS20P59510 1910 aa6.38□□□□□ -1.39
LRCH3-212ENST00000466845 AKNAQ7Z591 1439 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TCRBV5S2A0A599 114 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 B3GALNT1O75752 331 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 PABPC1P11940 636 aaKnown RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 HARSP12081 509 aaKnown RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 GZMAP12544 262 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 CAPN3P20807 821 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 GALNSP34059 522 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 HSPA4P34932 840 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 CTNNA1P35221 906 aaKnown RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 GRIA2P42262 883 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 NEK2P51955 445 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 SPIRE1Q08AE8 756 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 IFRD2Q12894 506 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TBX2Q13207 712 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 GRM1Q13255 1194 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 PICALMQ13492 652 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 SPDYCQ5MJ68 293 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 FAM102BQ5T8I3 360 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 FAM180BQ6P0A1 224 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 ABRAXAS1Q6UWZ7 409 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TOGARAM2Q6ZUX3 1019 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 NEK10Q6ZWH5 1172 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 OTOP3Q7RTS5 596 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 LRP10Q7Z4F1 713 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 SRLQ86TD4 932 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 LRRC49Q8IUZ0 686 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 THEMISQ8N1K5 641 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 SYT8Q8NBV8 401 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 PJA1Q8NG27 643 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TTLL11Q8NHH1 800 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 SPATA18Q8TC71 538 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 RTF1Q92541 710 aaKnown RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TIFAQ96CG3 184 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TMEM209Q96SK2 561 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 ALG13Q9NP73 1137 aaKnown RBP6.37□□□□□ -1.39
LRCH3-212ENST00000466845 PLCB1Q9NQ66 1216 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 TCF7L2Q9NQB0 619 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 BLOC1S4Q9NUP1 217 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 FAM184BQ9ULE4 1060 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 C2CD2Q9Y426 696 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 PCDHGB3Q9Y5G1 929 aa6.37□□□□□ -1.39
LRCH3-212ENST00000466845 CDK13Q14004 1512 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 NEO1Q92859 1461 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 PHLDB1Q86UU1 1377 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 C9orf118A6NHY6 69 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 AKR1B15C9JRZ8 316 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 PRODHO43272 600 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 PLOD3O60568 738 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 CNOT4O95628 575 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 SLC4A1P02730 911 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 LCP1P13796 627 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 GTF2A1P52655 376 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 TPD52P55327 224 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 GPR85P60893 370 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 STK3Q13188 491 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 RASGRF1Q13972 1273 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 ACAP1Q15027 740 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 LONRF2Q1L5Z9 754 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 UBXN11Q5T124 520 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 STYK1Q6J9G0 422 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 LBX2Q6XYB7 198 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 USP53Q70EK8 1073 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 ZNF761Q86XN6 746 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 SCUBE1Q8IWY4 988 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 RTKN2Q8IZC4 609 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 DCLK2Q8N568 766 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 NKAPQ8N5F7 415 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 MAGEB6Q8N7X4 407 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 LSMEM1Q8N8F7 131 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 BICD2Q8TD16 824 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 ADAMTS17Q8TE56 1095 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 ARHGEF2Q92974 986 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 RBM18Q96H35 190 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 CLIC6Q96NY7 704 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 TSGA13Q96PP4 275 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 NEK1Q96PY6 1258 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 DNAJC7Q99615 494 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 ELAC2Q9BQ52 826 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 PHF20Q9BVI0 1012 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 SARGQ9BW04 601 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 SLC13A1Q9BZW2 595 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 NCOA5Q9HCD5 579 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 KIAA1586Q9HCI6 787 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 DDX21Q9NR30 783 aaKnown RBP eCLIP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 RASSF1Q9NS23 344 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 MYOTQ9UBF9 498 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 SUFUQ9UMX1 484 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms