RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 NMT1P30419 496 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 MRPS35P82673 323 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 SARNPP82979 210 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 IL9RQ01113 521 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 NR1H3Q13133 447 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 STAT4Q14765 748 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 SETDB1Q15047 1291 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 WASHC2DQ5SRD0 308 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CEP128Q6ZU80 1094 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 C1orf186Q6ZWK4 172 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CLEC10AQ8IUN9 316 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 LMNTD2Q8IXW0 634 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 RPUSD2Q8IZ73 545 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 ANKRD35Q8N283 1001 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 MYCT1Q8N699 235 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 GDAP1Q8TB36 358 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 GRK7Q8WTQ7 553 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 STK32AQ8WU08 396 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 TMEM174Q8WUU8 243 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 DCAF4Q8WV16 495 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 PSPC1Q8WXF1 523 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 UIMC1Q96RL1 719 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CRAMP1Q96RY5 1269 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 FIZ1Q96SL8 496 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 EIF2AK1Q9BQI3 630 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 EURLQ9NYK6 297 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 NINJ2Q9NZG7 142 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 KCND2Q9NZV8 630 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 USH1CQ9Y6N9 552 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 NRAPQ86VF7 1730 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ZNF536O15090 1300 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 QSER1Q2KHR3 1735 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 TRAFD1O14545 582 aaPredicted RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 MSH4O15457 936 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 LRRN2O75325 713 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 DCTN3O75935 186 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CYP3A4P08684 503 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ABHD2P08910 425 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ATP6V1C1P21283 382 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ATP2B4P23634 1241 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 IVDP26440 423 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 RXRBP28702 533 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 SHMT1P34896 483 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CHKAP35790 457 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 KCNJ1P48048 391 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 SLC18A1P54219 525 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CETN1Q12798 172 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 LBRQ14739 615 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 SGSM1Q2NKQ1 1148 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 EPC2Q52LR7 807 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 RC3H1Q5TC82 1133 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 KCTD1Q719H9 257 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ZNF720Q7Z2F6 126 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP48-206ENST00000464577 BBOF1Q8ND07 529 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ZNF564Q8TBZ8 553 aaPredicted RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 PIGOQ8TEQ8 1089 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CCDC77Q9BR77 488 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 TRAIPQ9BWF2 469 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 FOXP3Q9BZS1 431 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 MYLK2Q9H1R3 596 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 UBN1Q9NPG3 1134 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ASIC3Q9UHC3 531 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 SERPINB13Q9UIV8 391 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 NOCTQ9UK39 431 aaKnown RBP7.8□□□□□ -1.16
USP48-206ENST00000464577 GTF3C4Q9UKN8 822 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 DAGLAQ9Y4D2 1042 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 ANKRD33BA6NCL7 494 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FAM47DPA6NHR8 397 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FAM86B1E9PN63 330 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 MAPK13O15264 365 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 PMM2O15305 246 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 THAP12O43422 761 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 NPTXRO95502 500 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 GAS8O95995 478 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 GH1P01241 217 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 LMNAP02545 664 aaKnown RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 FAM86B2P0C5J1 330 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 TPBGLP0DKB5 382 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ATF2P15336 505 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ACADSP16219 412 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 CHRNB2P17787 502 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ATP4AP20648 1035 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FOXN2P32314 431 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 CYP2J2P51589 502 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 CYP4A11Q02928 519 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 COG2Q14746 738 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 NFIXQ14938 502 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ZC2HC1CQ53FD0 456 aaPredicted RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 MFSD14BQ5SR56 506 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 AP1ARQ63HQ0 302 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ARHGEF19Q8IW93 802 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ASAP3Q8TDY4 903 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FBXO41Q8TF61 875 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 PCDHB18PQ96TA0 734 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms