RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 AKAP5P24588 427 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 RARRES1P49788 294 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 HSP90AA2PQ14568 343 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-210ENST00000464078 RTP2Q5QGT7 225 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 ZC3H14Q6PJT7 736 aaKnown RBP19.18■□□□□ 0.66
HMGN1-210ENST00000464078 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 TNFRSF25Q93038 417 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 PRIMPOLQ96LW4 560 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 PDRG1Q9NUG6 133 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 SIT1Q9Y3P8 196 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 NUMBLQ9Y6R0 609 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 DOCK6Q96HP0 2047 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 MIA3Q5JRA6 1907 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 DNAH14Q0VDD8 3507 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 FAM205CA6NFA0 338 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 PFKFB2O60825 505 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 NPTXRO95502 500 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 HNRNPA1P09651 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
HMGN1-210ENST00000464078 RPL17P18621 184 aaKnown RBP19.17■□□□□ 0.66
HMGN1-210ENST00000464078 HOXA9P31269 272 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 TUSC3Q13454 348 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 PJA1Q8NG27 643 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 PIK3R5Q8WYR1 880 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 CCDC43Q96MW1 224 aaKnown RBP19.17■□□□□ 0.66
HMGN1-210ENST00000464078 PCDHA12Q9UN75 941 aa19.17■□□□□ 0.66
HMGN1-210ENST00000464078 POU2F2P09086 479 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 FSHRP23945 695 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 STARD6P59095 220 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 CDCA2Q69YH5 1023 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-210ENST00000464078 DCLRE1AQ6PJP8 1040 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 PRSS55Q6UWB4 352 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-210ENST00000464078 GLYCTKQ8IVS8 523 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 POLR3FQ9H1D9 316 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-210ENST00000464078 CDH7Q9ULB5 785 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 R4GN57 208 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 EPG5Q9HCE0 2579 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 PATJQ8NI35 1801 aa19.16■□□□□ 0.66
HMGN1-210ENST00000464078 VWA8A3KMH1 1905 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 TADA2AO75478 443 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 DCNP07585 359 aaKnown RBP19.15■□□□□ 0.66
HMGN1-210ENST00000464078 XRCC6P12956 609 aaKnown RBP eCLIP19.15■□□□□ 0.66
HMGN1-210ENST00000464078 KRT2P35908 639 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 NR5A1Q13285 461 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 CALCRLQ16602 461 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 FAM187BQ17R55 369 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 LIN9Q5TKA1 542 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 CDR2LQ86X02 465 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-210ENST00000464078 C1orf210Q8IVY1 113 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 WASF1Q92558 559 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 FGF14Q92915 247 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 SHDQ96IW2 340 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 CLSTN3Q9BQT9 956 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 PAAF1Q9BRP4 392 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 TTPALQ9BTX7 342 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 DDX23Q9BUQ8 820 aaKnown RBP19.15■□□□□ 0.66
HMGN1-210ENST00000464078 TTC12Q9H892 705 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-210ENST00000464078 PRMT7Q9NVM4 692 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-210ENST00000464078 KLK14Q9P0G3 267 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 PARP2Q9UGN5 583 aa19.15■□□□□ 0.66
HMGN1-210ENST00000464078 PTGESO14684 152 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 KIF4AO95239 1232 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 CTDNEP1O95476 244 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 SP9P0CG40 484 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 ELAVL2Q12926 359 aaKnown RBP19.14■□□□□ 0.65
HMGN1-210ENST00000464078 PSMD5Q16401 504 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 PDXDC1Q6P996 788 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 MCPH1Q8NEM0 835 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 LNX1Q8TBB1 728 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-210ENST00000464078 RABGGTAQ92696 567 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 FZD8Q9H461 694 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 BRMS1Q9HCU9 246 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 ORC3Q9UBD5 711 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-210ENST00000464078 CACNG4Q9UBN1 327 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 TPCN1Q9ULQ1 816 aa19.14■□□□□ 0.65
HMGN1-210ENST00000464078 NEMFO60524 1076 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 USO1O60763 962 aaKnown RBP19.13■□□□□ 0.65
HMGN1-210ENST00000464078 C8AP07357 584 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 GLULP15104 373 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 NAB2Q15742 525 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 PARM1Q6UWI2 310 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 GRASPQ7Z6J2 395 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-210ENST00000464078 RMDN1Q96DB5 314 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
HMGN1-210ENST00000464078 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-210ENST00000464078 CASTOR2A6NHX0 329 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 LRRIQ4A6NIV6 560 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 N4BP3O15049 544 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 FDPSP14324 419 aaKnown RBP19.12■□□□□ 0.65
HMGN1-210ENST00000464078 PPM1LQ5SGD2 360 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 FAM171A1Q5VUB5 890 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 RTL10Q7L3V2 364 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 PIGOQ8TEQ8 1089 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 RUBCNQ92622 972 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 FGF13Q92913 245 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
HMGN1-210ENST00000464078 RPP25Q9BUL9 199 aaKnown RBP19.12■□□□□ 0.65
HMGN1-210ENST00000464078 OSBPL6Q9BZF3 934 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms