RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 TFDP1Q14186 410 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
PCCB-203ENST00000462542 C4orf19Q8IY42 314 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
PCCB-203ENST00000462542 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 PIK3R5Q8WYR1 880 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 CHAMP1Q96JM3 812 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 CLSTN3Q9BQT9 956 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 TTPALQ9BTX7 342 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
PCCB-203ENST00000462542 PRMT8Q9NR22 394 aaPredicted RBP12.98□□□□□ -0.33
PCCB-203ENST00000462542 GDE1Q9NZC3 331 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 VPS54Q9P1Q0 977 aa12.98□□□□□ -0.33
PCCB-203ENST00000462542 PATJQ8NI35 1801 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 NID2Q14112 1375 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 EML1O00423 815 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 MAN2B1O00754 1011 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 FOXD2O60548 495 aaPredicted RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 TDP2O95551 362 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 C8AP07357 584 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 IFNAR1P17181 557 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 NTHL1P78549 312 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 NTRK3Q16288 839 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 PRSS55Q6UWB4 352 aaPredicted RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 Q6ZUG5 572 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 ITFG1Q8TB96 612 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 NETO1Q8TDF5 533 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 DDX25Q9UHL0 483 aaKnown RBP12.97□□□□□ -0.33
PCCB-203ENST00000462542 PCDHA4Q9UN74 947 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 HES2Q9Y543 173 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
PCCB-203ENST00000462542 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 CHD6Q8TD26 2715 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 INO80B-WBP1J3KQ70 363 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 SLC30A4O14863 429 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 CCL16O15467 120 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 AKAP5P24588 427 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 YWHABP31946 246 aaKnown RBP12.96□□□□□ -0.33
PCCB-203ENST00000462542 FZD5Q13467 585 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 EMC2Q15006 297 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 EPHA7Q15375 998 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 PSMD5Q16401 504 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 RTP2Q5QGT7 225 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 LAIR1Q6GTX8 287 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 SLC27A1Q6PCB7 646 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 DDX1Q92499 740 aaKnown RBP12.96□□□□□ -0.33
PCCB-203ENST00000462542 BRF1Q92994 677 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 MTRQ99707 1265 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 KXD1Q9BQD3 176 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 APOL6Q9BWW8 343 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 NFKBIZQ9BYH8 718 aa12.96□□□□□ -0.33
PCCB-203ENST00000462542 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
PCCB-203ENST00000462542 A0A1B0GUA9 196 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 RETP07949 1114 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 ARF4P18085 180 aaPredicted RBP12.95□□□□□ -0.34
PCCB-203ENST00000462542 MTAPQ13126 283 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 TUSC3Q13454 348 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 RAB33AQ14088 237 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 AMHR2Q16671 573 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 PABPC1LQ4VXU2 614 aaKnown RBP12.95□□□□□ -0.34
PCCB-203ENST00000462542 XKR9Q5GH70 373 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 PPM1JQ5JR12 505 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
PCCB-203ENST00000462542 FAM171A1Q5VUB5 890 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 TSSK4Q6SA08 328 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 NPAS3Q8IXF0 933 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 TRIM22Q8IYM9 498 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 NXF3Q9H4D5 531 aaKnown RBP12.95□□□□□ -0.34
PCCB-203ENST00000462542 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 PARD6AQ9NPB6 346 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 PARP2Q9UGN5 583 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 VAV3Q9UKW4 847 aa12.95□□□□□ -0.34
PCCB-203ENST00000462542 MRPS23Q9Y3D9 190 aaKnown RBP12.95□□□□□ -0.34
PCCB-203ENST00000462542 CHD8Q9HCK8 2581 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 M0R2N6 131 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 TBX3O15119 743 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 SPEM2Q0P670 501 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 PPP4R3AQ6IN85 833 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 SLC7A14Q8TBB6 771 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 ELSPBP1Q96BH3 223 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms