RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 RAD9AQ99638 391 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 UBN1Q9NPG3 1134 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 TBC1D7Q9P0N9 293 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 INSL6Q9Y581 213 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 PCDHA11Q9Y5I1 949 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 STYXL1Q9Y6J8 313 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 MYH11P35749 1972 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 ZMYM2Q9UBW7 1377 aa10.88□□□□□ -0.67
VPS45-204ENST00000460366 MICAL3Q7RTP6 2002 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 ABLIM1O14639 778 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 CLDN3O15551 220 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 KIF20AO95235 890 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 MBD3O95983 291 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 MYBP10242 640 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 ATF7P17544 494 aaPredicted RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 PTMSP20962 102 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 LIG4P49917 911 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 CASP5P51878 434 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 POU5F1Q01860 360 aaKnown RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 MCL1Q07820 350 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 PNOCQ13519 176 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 RAB30Q15771 203 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 COBLL1Q53SF7 1204 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 EEF1DP3Q658K8 133 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 SMARCE1Q969G3 411 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 ZNF689Q96CS4 500 aaPredicted RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 BICD1Q96G01 975 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 TRIM6Q9C030 488 aaPredicted RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 TMEM117Q9H0C3 514 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 CLSTN2Q9H4D0 955 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 CGNQ9P2M7 1197 aaKnown RBP10.87□□□□□ -0.67
VPS45-204ENST00000460366 MSRAQ9UJ68 235 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 IPPQ9Y573 584 aa10.87□□□□□ -0.67
VPS45-204ENST00000460366 A0A0B4J269 797 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 HNRNPDLO14979 420 aaKnown RBP10.86□□□□□ -0.67
VPS45-204ENST00000460366 KIAA0391O15091 583 aaKnown RBP10.86□□□□□ -0.67
VPS45-204ENST00000460366 INPPL1O15357 1258 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 TLL1O43897 1013 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 PRPF6O94906 941 aaKnown RBP10.86□□□□□ -0.67
VPS45-204ENST00000460366 UPP2O95045 317 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 NPTXRO95502 500 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 ITGA4P13612 1032 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 GRM5P41594 1212 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 STK4Q13043 487 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 NOLC1Q14978 699 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS45-204ENST00000460366 KNOP1Q1ED39 458 aaKnown RBP10.86□□□□□ -0.67
VPS45-204ENST00000460366 ZNF568Q3ZCX4 644 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 AGMOQ6ZNB7 445 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 CMTR2Q8IYT2 770 aaKnown RBP10.86□□□□□ -0.67
VPS45-204ENST00000460366 SYCP3Q8IZU3 236 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 KIAA0895Q8NCT3 520 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 TMEM174Q8WUU8 243 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 SCFD1Q8WVM8 642 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 YME1L1Q96TA2 773 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 TCHPQ9BT92 498 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 FGFBP2Q9BYJ0 223 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 CDT1Q9H211 546 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 RC3H2Q9HBD1 1191 aaKnown RBP10.86□□□□□ -0.67
VPS45-204ENST00000460366 SLC39A2Q9NP94 309 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 RNF19AQ9NV58 838 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 USP20Q9Y2K6 914 aa10.86□□□□□ -0.67
VPS45-204ENST00000460366 TMEM265A0A087WTH1 108 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 CARNS1A5YM72 827 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GRXCR1A8MXD5 290 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 OGTO15294 1046 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 OFD1O75665 1012 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GARTP22102 1010 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 HOXD13P35453 343 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 PPP1R2P41236 205 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 COPS2P61201 443 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 KCNA1Q09470 495 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 HSP90AA2PQ14568 343 aaPredicted RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 HABP4Q5JVS0 413 aaKnown RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 ZNF658Q5TYW1 1059 aaPredicted RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 FAM109BQ6ICB4 259 aaPredicted RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 SLC39A4Q6P5W5 647 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GLB1LQ6UWU2 654 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 CDR2LQ86X02 465 aaPredicted RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 ABI1Q8IZP0 508 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GUF1Q8N442 669 aaKnown RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GLIS3Q8NEA6 775 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GOLGA5Q8TBA6 731 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GPT2Q8TD30 523 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 ZBTB45Q96K62 511 aaPredicted RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 CASD1Q96PB1 797 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 TSPAN18Q96SJ8 248 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 CCDC94Q9BW85 323 aaPredicted RBP10.85□□□□□ -0.67
VPS45-204ENST00000460366 PBX4Q9BYU1 374 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 RSAD1Q9HA92 442 aa10.85□□□□□ -0.67
VPS45-204ENST00000460366 PLEKHA5Q9HAU0 1116 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms